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Summary Expression Phenotypes Gene Literature (3) GO Terms (36) Nucleotides (145) Proteins (59) Interactants (258) Wiki
XB-GENEPAGE-486415

Show:     All X. tropicalis X. laevis

Nucleotide sequences for bhlhe40 - All

RefSeq mRNAs(6)
Models - Gene (37)
Models - mRNA (38)
mRNAs (13)
ESTs (30)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002938312 XM_002938312.5 class E basic helix-loop-helix protein 40 isoform X2 1882 bp XP_002938358 X. tropicalis
XM_004914135 XM_004914135.4 class E basic helix-loop-helix protein 40 isoform X1 1884 bp XP_004914192 X. tropicalis
XM_018259016 XM_018259016.2 class E basic helix-loop-helix protein 40 isoform X1 2289 bp XP_018114505 X. laevis.L
XM_018259017 XM_018259017.2 class E basic helix-loop-helix protein 40 isoform X2 2286 bp XP_018114506 X. laevis.L
XM_018261343 XM_018261343.2 class E basic helix-loop-helix protein 40 isoform X1 2018 bp XP_018116832 X. laevis.S
XM_018261344 XM_018261344.2 class E basic helix-loop-helix protein 40 isoform X2 2016 bp XP_018116833 X. laevis.S

Models - Gene (37)

Source Version Model Species
NCBI 10.1 XBXL10_1g22210 X. laevis.S
NCBI 10.1 XBXL10_1g19917 X. laevis.L
NCBI 10.0 XBXT10g012224 X. tropicalis
ENSEMBL 10.0 bhlhe40 X. tropicalis
Xenbase 9.2 gene18780 X. laevis.S
Xenbase 9.2 gene42431 X. laevis.L
JGI 9.1 Xelaev18025840m.g X. laevis.S
JGI 9.1 Xelaev18023910m.g X. laevis.L
Xenbase 9.1 gene3483 X. tropicalis
ENSEMBL 9.1 BHLHE40 X. tropicalis
JGI 8.0 Xetrov14020376m.g X. tropicalis
JGI 7.2 Xelaev16014940m.g X. laevis.L
JGI 7.1 Xetro.D02385 X. tropicalis
JGI 6.0 XeXenL6RMv10016367m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005207 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600070 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_360000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_360000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3600007 X. tropicalis
JGI 4.1 e_gw1.360.34.1 X. tropicalis
JGI 4.1 e_gw1.360.48.1 X. tropicalis
JGI 4.1 e_gw1.360.70.1 X. tropicalis
JGI 4.1 e_gw1.360.80.1 X. tropicalis
JGI 4.1 e_gw1.360.86.1 X. tropicalis
JGI 4.1 gw1.360.34.1 X. tropicalis
JGI 4.1 gw1.360.48.1 X. tropicalis
JGI 4.1 gw1.360.70.1 X. tropicalis
JGI 4.1 gw1.360.80.1 X. tropicalis
JGI 4.1 gw1.360.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3600019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600080 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3600005 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA36847 X. laevis.L
NCBI 10.1 XBmRNA41295 X. laevis.S
NCBI 10.0 mRNA060544 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081555 X. tropicalis
Xenbase 9.2 rna85325 X. laevis.L
Xenbase 9.2 rna54821 X. laevis.S
JGI 9.1 Xelaev18025840m X. laevis.S
Xenbase 9.1 rna11442 X. tropicalis
JGI 9.1 Xelaev18023910m X. laevis.L
ENSEMBL 9.1 ENSXETT00000081555 X. tropicalis
JGI 8.0 Xetrov14020376m X. tropicalis
JGI 7.2 Xelaev16014940m X. laevis.L
JGI 7.1 Xetro.D02385.1 X. tropicalis
JGI 7.1 Xetro.D02385.2 X. tropicalis
JGI 6.0 XeXenL6RMv10016367m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_360000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000023 X. tropicalis
JGI 4.1 e_gw1.360.34.1 X. tropicalis
JGI 4.1 gw1.360.34.1 X. tropicalis
JGI 4.1 gw1.360.48.1 X. tropicalis
JGI 4.1 gw1.360.70.1 X. tropicalis
JGI 4.1 gw1.360.80.1 X. tropicalis
JGI 4.1 gw1.360.86.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_360000007 X. tropicalis
JGI 4.1 e_gw1.360.48.1 X. tropicalis
JGI 4.1 e_gw1.360.70.1 X. tropicalis
JGI 4.1 e_gw1.360.80.1 X. tropicalis
JGI 4.1 e_gw1.360.86.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000011372 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3600005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3600007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3600019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600070 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600080 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_360000005 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7848691 BC122074 X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8903172 BC154864 X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8894772 BC168818 X. tropicalis
IMAGE:8869366 BC169139 X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
XM_002938312 X. tropicalis
XM_004914135 X. tropicalis
IMAGE:5507041 BC073563 X. laevis.L
IMAGE:8329102 BC123308 X. laevis.L
XM_018259016 X. laevis.L
XM_018259017 X. laevis.L
IMAGE:8526743 BC129575 X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XM_018261343 X. laevis.S
XM_018261344 X. laevis.S

ESTs (30)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8959009 EL656704 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7613192 CX388805 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7762919 DR887953 5' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:8869366 EL710532 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8905668 EL797679 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8903172 EL806917 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8911598 EL808018 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7674490 CX884653 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7853644 DT394695 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7848691 DT533745 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7762919 DR887952 3' X. tropicalis NIH_XGC_tropMet2 whole organism NF stage 62
IMAGE:8869366 EL710531 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7852464 DT392728 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8905655 EL797606 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7853644 DT394694 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8905668 EL797680 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8903172 EL806918 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7848691 DT533744 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8911598 EL808019 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7674490 CX884652 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8544075 EB481507 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGp998D1611704 BX846192 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:8546083 EB466203 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:3436402 BF610984 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:8536416 EB470894 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8643852 EB736547 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8643987 EB736863 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL074j11 BJ061964 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074j11 BJ080130 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5278815 BQ398893 3' X. laevis.L Soares NXEG egg unfertilized egg stage