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Summary Expression Phenotypes Gene Literature (40) GO Terms (76) Nucleotides (161) Proteins (47) Interactants (267) Wiki
XB-GENEPAGE-487546

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cd44 - All

RefSeq mRNAs(5)
Models - Gene (23)
Models - mRNA (26)
mRNAs (12)
ESTs (40)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_203617 NM_203617.1 CD44 antigen precursor 3328 bp NP_988948 X. tropicalis
XM_031899934 XM_031899934.1 XP_031755794.1 CD44 antigen isoform X1 3200 bp XP_031755794 X. tropicalis
XM_018256676 XM_018256676.2 CD44 antigen isoform X1 3546 bp XP_018112165 X. laevis.L
XM_018256677 XM_018256677.2 CD44 antigen isoform X2 3081 bp XP_018112166 X. laevis.L
XM_018260263 XM_018260263.2 CD44 antigen 4010 bp XP_018115752 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g17732 X. laevis.L
NCBI 10.1 XBXL10_1g20954 X. laevis.S
NCBI 10.0 XBXT10g003941 X. tropicalis
ENSEMBL 10.0 cd44 X. tropicalis
Xenbase 9.2 gene7761 X. laevis.S
Xenbase 9.2 gene45623 X. laevis.L
JGI 9.1 Xelaev18024504m.g X. laevis.S
JGI 9.1 Xelaev18021845m.g X. laevis.L
Xenbase 9.1 gene5517 X. tropicalis
ENSEMBL 9.1 cd44 X. tropicalis
JGI 8.0 Xetrov14016442m.g X. tropicalis
JGI 7.2 Xelaev16033558m.g X. laevis.L
JGI 7.1 Xetro.D00112 X. tropicalis
JGI 6.0 XeXenL6RMv10025232m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007556 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_281000016 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_281000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000050 X. tropicalis
JGI 4.1 gw1.281.160.1 X. tropicalis
JGI 4.1 e_gw1.281.161.1 X. tropicalis
JGI 4.1 e_gw1.281.160.1 X. tropicalis
JGI 4.1 gw1.281.161.1 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA38758 X. laevis.S
NCBI 10.1 XBmRNA32675 X. laevis.L
ENSEMBL 10.0 ENSXETT00000016456 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080787 X. tropicalis
NCBI 10.0 mRNA019847 X. tropicalis
Xenbase 9.2 rna90092 X. laevis.L
Xenbase 9.2 rna22659 X. laevis.S
Xenbase 9.1 rna17901 X. tropicalis
JGI 9.1 Xelaev18024504m X. laevis.S
JGI 9.1 Xelaev18021845m X. laevis.L
ENSEMBL 9.1 ENSXETT00000080787 X. tropicalis
ENSEMBL 9.1 ENSXETT00000016456 X. tropicalis
JGI 8.0 Xetrov14016442m X. tropicalis
JGI 7.2 Xelaev16033558m X. laevis.L
JGI 7.1 Xetro.D00112.1 X. tropicalis
JGI 7.1 Xetro.D00112.2 X. tropicalis
JGI 6.0 XeXenL6RMv10025232m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_281000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000049 X. tropicalis
JGI 4.1 e_gw1.281.161.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_281000011 X. tropicalis
JGI 4.1 e_gw1.281.160.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016456 X. tropicalis
JGI 4.1 gw1.281.160.1 X. tropicalis
JGI 4.1 gw1.281.161.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:5382413 BC061327 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_203617 X. tropicalis
XM_031899934 X. tropicalis
IMAGE:7008877 BC074228 X. laevis.L
IMAGE:7011349 BC092113 X. laevis.L
IMAGE:6957504 BC111505 X. laevis.L
DQ143881 X. laevis.L
NM_001091833 X. laevis.L
XM_018256676 X. laevis.L
XM_018256677 X. laevis.L
IMAGE:5515038 BC084611 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018260263 X. laevis.S

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7660488 CX841411 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661780 CX843515 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTpA037a15 BX736629 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7599960 CX344761 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623083 CX372403 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633073 CX374502 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6983793 CF150737 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6983250 CF226746 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5382413 BQ393883 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8928925 EL677688 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:5379236 BQ522989 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6999457 CF344047 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999457 CF344048 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7654340 CX823943 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7668696 CX874692 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7853558 DT394765 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7668696 CX874691 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7654340 CX823942 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7853558 DT394764 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:5382413 BQ393882 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8928925 EL677687 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:6983250 CF226747 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7599960 CX344760 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7661780 CX843514 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:5379236 BQ522988 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7660488 CX841410 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7623083 DR899196 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633073 DR901575 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8538615 EB481745 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
XL453l16ex BP687270 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5515038 CF287586 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8535784 EB469864 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:6872362 CB197480 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6936201 CB984129 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6936201 CD811295 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL073c05 BJ061493 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089g09 BJ084492 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066g24 BJ078871 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL073c05 BJ079680 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6872362 CB565840 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62