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Summary Expression Phenotypes Gene Literature (30) GO Terms (30) Nucleotides (119) Proteins (50) Interactants (700) Wiki
XB-GENEPAGE-488066

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sox7 - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (34)
mRNAs (8)
ESTs (21)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016326 NM_001016326.2 transcription factor Sox-7 2055 bp NP_001016326 X. tropicalis
NM_001085868 NM_001085868.1 transcription factor Sox-7 1980 bp NP_001079337 X. laevis.L
XM_018266019 XM_018266019.2 transcription factor Sox-7-like 2096 bp XP_018121508 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g26287 X. laevis.S
NCBI 10.1 XBXL10_1g24561 X. laevis.L
NCBI 10.0 XBXT10g005756 X. tropicalis
ENSEMBL 10.0 sox7 X. tropicalis
Xenbase 9.2 gene35378 X. laevis.S
Xenbase 9.2 gene2787 X. laevis.L
JGI 9.1 Xelaev18030202m.g X. laevis.S
JGI 9.1 Xelaev18028242m.g X. laevis.L
Xenbase 9.1 gene4860 X. tropicalis
ENSEMBL 9.1 sox7 X. tropicalis
JGI 8.0 Xetrov14042543m.g X. tropicalis
JGI 7.2 Xelaev16000442m.g X. laevis.L
JGI 7.1 Xetro.K05126 X. tropicalis
JGI 6.0 XeXenL6RMv10036653m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000693 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_630024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000098 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000099 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_63000024 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630088 X. tropicalis
JGI 4.1 e_gw1.63.264.1 X. tropicalis
JGI 4.1 e_gw1.63.448.1 X. tropicalis
JGI 4.1 e_gw1.63.487.1 X. tropicalis
JGI 4.1 gw1.63.264.1 X. tropicalis
JGI 4.1 gw1.63.448.1 X. tropicalis
JGI 4.1 gw1.63.487.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630264 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630448 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630487 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630098 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630099 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_630022 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_63000010 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA45922 X. laevis.L
NCBI 10.1 XBmRNA49124 X. laevis.S
NCBI 10.0 mRNA028501 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001530 X. tropicalis
Xenbase 9.2 rna8107 X. laevis.L
Xenbase 9.2 rna75341 X. laevis.S
JGI 9.1 Xelaev18030202m X. laevis.S
Xenbase 9.1 rna15838 X. tropicalis
JGI 9.1 Xelaev18028242m X. laevis.L
ENSEMBL 9.1 ENSXETT00000001530 X. tropicalis
JGI 8.0 Xetrov14042543m X. tropicalis
JGI 7.2 Xelaev16000442m X. laevis.L
JGI 7.1 Xetro.K05126.1 X. tropicalis
JGI 7.1 Xetro.K05126.2 X. tropicalis
JGI 6.0 XeXenL6RMv10036653m X. laevis.L
JGI 4.1 e_gw1.63.264.1 X. tropicalis
JGI 4.1 gw1.63.264.1 X. tropicalis
JGI 4.1 gw1.63.448.1 X. tropicalis
JGI 4.1 gw1.63.487.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_63000010 X. tropicalis
JGI 4.1 e_gw1.63.448.1 X. tropicalis
JGI 4.1 e_gw1.63.487.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001530 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_630024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630098 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630099 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_630022 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630264 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630448 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630487 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_63000024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000098 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000099 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:9040117 BC170859 X. tropicalis
TEgg131e23 CR761431 X. tropicalis
NM_001016326 X. tropicalis
IMAGE:9093916 BC170530 X. laevis.L
IMAGE:9093917 BC170531 X. laevis.L
D83649 X. laevis.L
NM_001085868 X. laevis.L
XM_018266019 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr10G24 CN095707 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7532350 CX433029 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA042f03 CR438185 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7593537 CX327605 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600337 CX345006 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4933 CX413709 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CABC4453 DR833300 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7804601 DR839696 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TGas110f06 AL962859 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7550849 CX509496 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu002h05 AL640280 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu033e11 AL655836 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040l13 AL660622 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6978576 CF149923 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7550849 CX509495 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA020c08 CR571764 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
CABC4453 DR833299 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7600337 CX345005 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr10G24 CN095706 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XZT4933 CX413708 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7804601 DR839695 3' X. tropicalis NIH_XGC_tropFat1 fat body frog