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Summary Expression Phenotypes Gene Literature (4) GO Terms (54) Nucleotides (88) Proteins (60) Interactants (163) Wiki
XB-GENEPAGE-488738

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hdac9 - All

RefSeq mRNAs(11)
Models - Gene (22)
Models - mRNA (33)
mRNAs (14)
ESTs (5)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
XM_002933292 XM_002933292.5 histone deacetylase 9 isoform X3 4910 bp XP_002933338 X. tropicalis
XM_004915413 XM_004915413.4 histone deacetylase 9 isoform X1 6775 bp XP_004915470 X. tropicalis
XM_031903789 XM_031903789.1 XP_031759649.1 histone deacetylase 9 isoform X2 6496 bp XP_031759649 X. tropicalis
XM_031903790 XM_031903790.1 XP_031759650.1 histone deacetylase 9 isoform X4 6185 bp XP_031759650 X. tropicalis
NM_001085838 NM_001085838.1 histone deacetylase 9 4435 bp NP_001079307 X. laevis.S
XM_018268554 XM_018268554.2 histone deacetylase 9 isoform X1 3930 bp XP_018124043 X. laevis.S
XM_041567066 XM_041567066.1 XP_041423000.1 histone deacetylase 9 isoform X2 3706 bp XP_041423000 X. laevis.S
XM_018267376 XM_018267376.2 histone deacetylase 9-like isoform X1 2846 bp XP_018122865 X. laevis.L
XM_018267378 XM_018267378.2 histone deacetylase 9-like isoform X3 2942 bp XP_018122867 X. laevis.L
XM_041565959 XM_041565959.1 XP_041421893.1 histone deacetylase 9-like isoform X2 2656 bp XP_041421893 X. laevis.L
XM_041565960 XM_041565960.1 XP_041421894.1 histone deacetylase 9-like isoform X4 2593 bp XP_041421894 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g28921 X. laevis.S
NCBI 10.1 XBXL10_1g27021 X. laevis.L
NCBI 10.0 XBXT10g009026 X. tropicalis
ENSEMBL 10.0 hdac9 X. tropicalis
Xenbase 9.2 gene44730 X. laevis.S
Xenbase 9.2 gene37537 X. laevis.L
JGI 9.1 Xelaev18033026m.g X. laevis.S
JGI 9.1 Xelaev18030959m.g X. laevis.L
Xenbase 9.1 gene33938 X. tropicalis
ENSEMBL 9.1 hdac9 X. tropicalis
JGI 8.0 Xetrov14026939m.g X. tropicalis
JGI 7.2 Xelaev16062928m.g X. laevis.S
JGI 7.1 Xetro.F01398 X. tropicalis
JGI 6.0 XeXenL6RMv10048499m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013445 X. tropicalis
JGI 4.1 e_gw1.52.116.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_52000040 X. tropicalis
JGI 4.1 gw1.52.164.1 X. tropicalis
JGI 4.1 e_gw1.52.134.1 X. tropicalis
JGI 4.1 gw1.52.134.1 X. tropicalis
JGI 4.1 gw1.52.116.1 X. tropicalis
JGI 4.1 e_gw1.52.164.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA50623 X. laevis.L
NCBI 10.1 XBmRNA54407 X. laevis.S
ENSEMBL 10.0 ENSXETT00000103531 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089241 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089286 X. tropicalis
NCBI 10.0 mRNA044715 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069235 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029457 X. tropicalis
Xenbase 9.2 rna78286 X. laevis.L
Xenbase 9.2 rna88759 X. laevis.S
ENSEMBL 9.1 ENSXETT00000089286 X. tropicalis
JGI 9.1 Xelaev18033026m X. laevis.S
JGI 9.1 Xelaev18030959m X. laevis.L
ENSEMBL 9.1 ENSXETT00000080644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089241 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098820 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029457 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069235 X. tropicalis
Xenbase 9.1 rna63911 X. tropicalis
JGI 8.0 Xetrov14026939m X. tropicalis
JGI 7.2 Xelaev16062928m X. laevis.S
JGI 7.1 Xetro.F01398.1 X. tropicalis
JGI 7.1 Xetro.F01398.2 X. tropicalis
JGI 6.0 XeXenL6RMv10048499m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_52000040 X. tropicalis
JGI 4.1 e_gw1.52.134.1 X. tropicalis
JGI 4.1 e_gw1.52.164.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029457 X. tropicalis
JGI 4.1 e_gw1.52.116.1 X. tropicalis
JGI 4.1 gw1.52.116.1 X. tropicalis
JGI 4.1 gw1.52.134.1 X. tropicalis
JGI 4.1 gw1.52.164.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
XM_002933292 X. tropicalis
XM_004915413 X. tropicalis
XM_031903789 X. tropicalis
XM_031903790 X. tropicalis
IMAGE:9093886 BC170501 X. laevis.S
IMAGE:9093889 BC170504 X. laevis.S
NM_001085838 X. laevis.S
XM_018268554 X. laevis.S
XM_041567066 X. laevis.S
Z97214 X. laevis.S
XM_018267376 X. laevis.L
XM_018267378 X. laevis.L
XM_041565959 X. laevis.L
XM_041565960 X. laevis.L

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7690980 CX915717 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7847452 DT531700 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:3379200 BF048780 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
xl284n06 DC118856 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl284n06 DC084142 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15