Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (8) GO Terms (103) Nucleotides (123) Proteins (74) Interactants (192) Wiki
XB-GENEPAGE-488766

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hdac4 - All

RefSeq mRNAs(16)
Models - Gene (25)
Models - mRNA (40)
mRNAs (16)
ESTs (8)

RefSeq mRNAs (16)

Accession Version Protein Name Length Protein Species
XM_004917882 XM_004917882.4 histone deacetylase 4 isoform X1 8558 bp XP_004917939 X. tropicalis
XM_004917883 XM_004917883.4 histone deacetylase 4 isoform X1 8544 bp XP_004917940 X. tropicalis
XM_004917884 XM_004917884.4 histone deacetylase 4 isoform X2 8380 bp XP_004917941 X. tropicalis
XM_004917885 XM_004917885.4 histone deacetylase 4 isoform X2 8062 bp XP_004917942 X. tropicalis
XM_004917886 XM_004917886.4 histone deacetylase 4 isoform X2 8005 bp XP_004917943 X. tropicalis
XM_018238911 XM_018238911.2 histone deacetylase 4 isoform X3 8185 bp XP_018094400 X. laevis.S
XM_018238912 XM_018238912.2 histone deacetylase 4 isoform X4 7929 bp XP_018094401 X. laevis.S
XM_018238913 XM_018238913.2 histone deacetylase 4 isoform X4 8006 bp XP_018094402 X. laevis.S
XM_041578787 XM_041578787.1 XP_041434721.1 histone deacetylase 4 isoform X1 7902 bp XP_041434721 X. laevis.S
XM_041578788 XM_041578788.1 XP_041434722.1 histone deacetylase 4 isoform X2 7904 bp XP_041434722 X. laevis.S
XM_018236037 XM_018236037.2 histone deacetylase 4 isoform X1 6309 bp XP_018091526 X. laevis.L
XM_018236038 XM_018236038.2 histone deacetylase 4 isoform X2 5170 bp XP_018091527 X. laevis.L
XM_018236039 XM_018236039.2 histone deacetylase 4 isoform X2 5156 bp XP_018091528 X. laevis.L
XM_018236040 XM_018236040.2 histone deacetylase 4 isoform X3 4995 bp XP_018091529 X. laevis.L
XM_018236041 XM_018236041.2 histone deacetylase 4 isoform X3 5128 bp XP_018091530 X. laevis.L
XM_041577278 XM_041577278.1 XP_041433212.1 histone deacetylase 4 isoform X4 4696 bp XP_041433212 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g40785 X. laevis.L
NCBI 10.1 XBXL10_1g43576 X. laevis.S
NCBI 10.0 XBXT10g008146 X. tropicalis
ENSEMBL 10.0 hdac4 X. tropicalis
Xenbase 9.2 gene12765 X. laevis.L
Xenbase 9.2 gene4908 X. laevis.S
JGI 9.1 Xelaev18047262m.g X. laevis.S
JGI 9.1 Xelaev18044814m.g X. laevis.L
Xenbase 9.1 gene22158 X. tropicalis
ENSEMBL 9.1 hdac4 X. tropicalis
JGI 7.1 Xetro.I00886 X. tropicalis
JGI 6.0 XeXenL6RMv10001339m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004880 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000065 X. tropicalis
JGI 4.1 gw1.15.103.1 X. tropicalis
JGI 4.1 gw1.15.104.1 X. tropicalis
JGI 4.1 gw1.15.282.1 X. tropicalis
JGI 4.1 e_gw1.15.104.1 X. tropicalis
JGI 4.1 e_gw1.15.282.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_150045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150104 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150282 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_150064 X. tropicalis
JGI 4.1 e_gw1.15.103.1 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA82000 X. laevis.S
NCBI 10.1 XBmRNA76823 X. laevis.L
ENSEMBL 10.0 ENSXETT00000104853 X. tropicalis
NCBI 10.0 mRNA040506 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085815 X. tropicalis
Xenbase 9.2 rna14332 X. laevis.S
Xenbase 9.2 rna37106 X. laevis.L
ENSEMBL 9.1 ENSXETT00000085815 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087918 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090056 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093422 X. tropicalis
Xenbase 9.1 rna45027 X. tropicalis
JGI 9.1 Xelaev18047262m X. laevis.S
ENSEMBL 9.1 ENSXETT00000010592 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070832 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072726 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073615 X. tropicalis
JGI 9.1 Xelaev18044814m X. laevis.L
ENSEMBL 9.1 ENSXETT00000100613 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104853 X. tropicalis
JGI 7.1 Xetro.I00886.3 X. tropicalis
JGI 7.1 Xetro.I00886.2 X. tropicalis
JGI 7.1 Xetro.I00886.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001339m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_150045 X. tropicalis
JGI 4.1 e_gw1.15.104.1 X. tropicalis
JGI 4.1 e_gw1.15.282.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010592 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010593 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010594 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010597 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_150064 X. tropicalis
JGI 4.1 e_gw1.15.103.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150104 X. tropicalis
JGI 4.1 estExt_Genewise1.C_150282 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000065 X. tropicalis
JGI 4.1 gw1.15.103.1 X. tropicalis
JGI 4.1 gw1.15.104.1 X. tropicalis
JGI 4.1 gw1.15.282.1 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
XM_004917882 X. tropicalis
XM_004917883 X. tropicalis
XM_004917884 X. tropicalis
XM_004917885 X. tropicalis
XM_004917886 X. tropicalis
XM_018238911 X. laevis.S
XM_018238912 X. laevis.S
XM_018238913 X. laevis.S
XM_041578787 X. laevis.S
XM_041578788 X. laevis.S
XM_018236037 X. laevis.L
XM_018236038 X. laevis.L
XM_018236039 X. laevis.L
XM_018236040 X. laevis.L
XM_018236041 X. laevis.L
XM_041577278 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7642529 CX796964 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
XL142o08 BJ093586 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6634599 BU909025 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
xlk142p23ex DC049471 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL092h06 BJ074204 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL142o08 BJ097765 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk142p23ex DC016182 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL092h06 BJ088281 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25