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Summary Expression Phenotypes Gene Literature (0) GO Terms (31) Nucleotides (218) Proteins (106) Interactants (40) Wiki
XB-GENEPAGE-489869

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pkp4 - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (33)
Models - mRNA (45)
mRNAs (6)
ESTs (27)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001270690 NM_001270690.1 plakophilin-4 4140 bp NP_001257619 X. tropicalis
XM_012970589 XM_012970589.3 plakophilin-4 isoform X1 3942 bp XP_012826043 X. tropicalis
XM_012970592 XM_012970592.3 plakophilin-4 isoform X4 3954 bp XP_012826046 X. tropicalis
XM_031892752 XM_031892752.1 XP_031748612.1 plakophilin-4 isoform X2 4395 bp XP_031748612 X. tropicalis
XM_031892753 XM_031892753.1 XP_031748613.1 plakophilin-4 isoform X3 3581 bp XP_031748613 X. tropicalis

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g006504 X. tropicalis
ENSEMBL 10.0 pkp4 X. tropicalis
Xenbase 9.1 gene22629 X. tropicalis
ENSEMBL 9.1 pkp4 X. tropicalis
JGI 8.0 Xetrov14037094m.g X. tropicalis
JGI 7.1 Xetro.I00249 X. tropicalis
ENSEMBL 4.1 ENSXETG00000010376 X. tropicalis
JGI 4.1 e_gw1.51.20.1 X. tropicalis
JGI 4.1 e_gw1.51.21.1 X. tropicalis
JGI 4.1 e_gw1.51.22.1 X. tropicalis
JGI 4.1 e_gw1.51.4.1 X. tropicalis
JGI 4.1 e_gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.106.1 X. tropicalis
JGI 4.1 gw1.51.126.1 X. tropicalis
JGI 4.1 gw1.51.163.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_51000046 X. tropicalis
JGI 4.1 gw1.51.178.1 X. tropicalis
JGI 4.1 gw1.51.19.1 X. tropicalis
JGI 4.1 gw1.51.20.1 X. tropicalis
JGI 4.1 gw1.51.21.1 X. tropicalis
JGI 4.1 gw1.51.22.1 X. tropicalis
JGI 4.1 gw1.51.7.1 X. tropicalis
JGI 4.1 gw1.51.4.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510106 X. tropicalis
JGI 4.1 gw1.51.164.1 X. tropicalis
JGI 4.1 e_gw1.51.106.1 X. tropicalis
JGI 4.1 e_gw1.51.126.1 X. tropicalis
JGI 4.1 e_gw1.51.163.1 X. tropicalis
JGI 4.1 e_gw1.51.164.1 X. tropicalis
JGI 4.1 e_gw1.51.178.1 X. tropicalis
JGI 4.1 e_gw1.51.19.1 X. tropicalis

mRNAs based on gene models(45)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000086167 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089268 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062483 X. tropicalis
NCBI 10.0 mRNA032124 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099573 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099573 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022793 X. tropicalis
Xenbase 9.1 rna45719 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062483 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086167 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089268 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089297 X. tropicalis
JGI 8.0 Xetrov14037094m X. tropicalis
JGI 7.1 Xetro.I00249.1 X. tropicalis
JGI 7.1 Xetro.I00249.2 X. tropicalis
JGI 4.1 gw1.51.163.1 X. tropicalis
JGI 4.1 gw1.51.164.1 X. tropicalis
JGI 4.1 gw1.51.178.1 X. tropicalis
JGI 4.1 gw1.51.19.1 X. tropicalis
JGI 4.1 gw1.51.20.1 X. tropicalis
JGI 4.1 gw1.51.21.1 X. tropicalis
JGI 4.1 gw1.51.22.1 X. tropicalis
JGI 4.1 gw1.51.4.1 X. tropicalis
JGI 4.1 e_gw1.51.106.1 X. tropicalis
JGI 4.1 gw1.51.7.1 X. tropicalis
JGI 4.1 e_gw1.51.126.1 X. tropicalis
JGI 4.1 e_gw1.51.163.1 X. tropicalis
JGI 4.1 e_gw1.51.164.1 X. tropicalis
JGI 4.1 e_gw1.51.178.1 X. tropicalis
JGI 4.1 e_gw1.51.19.1 X. tropicalis
JGI 4.1 e_gw1.51.20.1 X. tropicalis
JGI 4.1 e_gw1.51.21.1 X. tropicalis
JGI 4.1 e_gw1.51.22.1 X. tropicalis
JGI 4.1 e_gw1.51.4.1 X. tropicalis
JGI 4.1 e_gw1.51.7.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022793 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_510106 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_51000046 X. tropicalis
JGI 4.1 gw1.51.106.1 X. tropicalis
JGI 4.1 gw1.51.126.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7669448 BC125740 X. tropicalis NIH_XGC_tropBrn4 brain frog
NM_001270690 X. tropicalis
XM_012970589 X. tropicalis
XM_012970592 X. tropicalis
XM_031892752 X. tropicalis
XM_031892753 X. tropicalis

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu116m18 AL801370 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7524217 CX438572 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534101 CX428174 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528320 CX425246 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7518434 CX750408 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7643645 CX798748 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TTbA019c21 CR422854 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7659398 CX839040 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TNeu093p20 AL804280 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7669448 CX875907 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA020c21 CR421295 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA016d05 BX713968 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA016e12 CR564186 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7610651 CX377215 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA069p14 CR439868 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7559038 CX514093 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7669448 CX875906 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
TNeu093p20 BX695865 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA016d05 BX713969 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA019c21 CR422855 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA020c21 CR421296 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA016e12 CR564187 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7610651 CX377214 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559038 CX514092 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7643645 CX798747 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7659398 CX839039 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TNeu116m18 BX696981 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21