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Summary Expression Phenotypes Gene Literature (5) GO Terms (37) Nucleotides (179) Proteins (73) Interactants (382) Wiki
XB-GENEPAGE-490674

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smarcc2 - All

RefSeq mRNAs(12)
Models - Gene (23)
Models - mRNA (39)
mRNAs (17)
ESTs (54)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_002934495 XM_002934495.5 SWI/SNF complex subunit SMARCC2 isoform X4 5702 bp XP_002934541 X. tropicalis
XM_004911875 XM_004911875.4 SWI/SNF complex subunit SMARCC2 isoform X1 5928 bp XP_004911932 X. tropicalis
XM_004911876 XM_004911876.4 SWI/SNF complex subunit SMARCC2 isoform X2 5925 bp XP_004911933 X. tropicalis
XM_004911878 XM_004911878.4 SWI/SNF complex subunit SMARCC2 isoform X3 5732 bp XP_004911935 X. tropicalis
XM_012957799 XM_012957799.3 SWI/SNF complex subunit SMARCC2 isoform X5 5630 bp XP_012813253 X. tropicalis
XM_012957800 XM_012957800.3 SWI/SNF complex subunit SMARCC2 isoform X6 5627 bp XP_012813254 X. tropicalis
NM_001091927 NM_001091927.1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 L homeolog 4841 bp NP_001085396 X. laevis.L
XM_018250012 XM_018250012.2 SWI/SNF complex subunit SMARCC2 isoform X3 6386 bp XP_018105501 X. laevis.S
XM_018250014 XM_018250014.2 SWI/SNF complex subunit SMARCC2 isoform X5 6176 bp XP_018105503 X. laevis.S
XM_041584382 XM_041584382.1 XP_041440316.1 SWI/SNF complex subunit SMARCC2 isoform X1 6478 bp XP_041440316 X. laevis.S
XM_041584383 XM_041584383.1 XP_041440317.1 SWI/SNF complex subunit SMARCC2 isoform X2 6473 bp XP_041440317 X. laevis.S
XM_041584384 XM_041584384.1 XP_041440318.1 SWI/SNF complex subunit SMARCC2 isoform X4 5529 bp XP_041440318 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g8052 X. laevis.L
NCBI 10.1 XBXL10_1g10702 X. laevis.S
NCBI 10.0 XBXT10g000258 X. tropicalis
ENSEMBL 10.0 smarcc2 X. tropicalis
Xenbase 9.2 gene46807 X. laevis.S
Xenbase 9.2 gene35021 X. laevis.L
JGI 9.1 Xelaev18015860m.g X. laevis.S
JGI 9.1 Xelaev18013362m.g X. laevis.L
Xenbase 9.1 gene23442 X. tropicalis
ENSEMBL 9.1 smarcc2 X. tropicalis
JGI 8.0 Xetrov14009983m.g X. tropicalis
JGI 7.2 Xelaev16014368m.g X. laevis.L
JGI 7.1 Xetro.B01315 X. tropicalis
JGI 6.0 XeXenL6RMv10039886m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009486 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_101000029 X. tropicalis
JGI 4.1 gw1.101.91.1 X. tropicalis
JGI 4.1 gw1.101.121.1 X. tropicalis
JGI 4.1 e_gw1.101.175.1 X. tropicalis
JGI 4.1 e_gw1.101.121.1 X. tropicalis
JGI 4.1 gw1.101.175.1 X. tropicalis
JGI 4.1 e_gw1.101.91.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000099 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.1 XBmRNA15215 X. laevis.L
NCBI 10.1 XBmRNA20101 X. laevis.S
NCBI 10.0 mRNA001403 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094399 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078782 X. tropicalis
ENSEMBL 10.0 ENSXETT00000020949 X. tropicalis
Xenbase 9.2 rna74786 X. laevis.L
Xenbase 9.2 rna91725 X. laevis.S
Xenbase 9.1 rna46995 X. tropicalis
JGI 9.1 Xelaev18015860m X. laevis.S
JGI 9.1 Xelaev18013362m X. laevis.L
ENSEMBL 9.1 ENSXETT00000098724 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097726 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094399 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093774 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088461 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085741 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081162 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078782 X. tropicalis
ENSEMBL 9.1 ENSXETT00000020949 X. tropicalis
ENSEMBL 9.1 ENSXETT00000020938 X. tropicalis
JGI 8.0 Xetrov14009983m X. tropicalis
JGI 7.2 Xelaev16014368m X. laevis.L
JGI 7.1 Xetro.B01315.6 X. tropicalis
JGI 7.1 Xetro.B01315.2 X. tropicalis
JGI 7.1 Xetro.B01315.3 X. tropicalis
JGI 7.1 Xetro.B01315.4 X. tropicalis
JGI 7.1 Xetro.B01315.1 X. tropicalis
JGI 7.1 Xetro.B01315.5 X. tropicalis
JGI 6.0 XeXenL6RMv10039886m X. laevis.L
JGI 4.1 gw1.101.121.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_101000029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_101000099 X. tropicalis
JGI 4.1 e_gw1.101.91.1 X. tropicalis
JGI 4.1 e_gw1.101.175.1 X. tropicalis
JGI 4.1 e_gw1.101.121.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020938 X. tropicalis
JGI 4.1 gw1.101.175.1 X. tropicalis
JGI 4.1 gw1.101.91.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:7670651 BC136222 X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662362 BC153366 X. tropicalis NIH_XGC_tropBrn3 brain frog
XM_002934495 X. tropicalis
XM_004911875 X. tropicalis
XM_004911876 X. tropicalis
XM_004911878 X. tropicalis
XM_012957799 X. tropicalis
XM_012957800 X. tropicalis
IMAGE:4173315 BC060337 X. laevis.L
IMAGE:4633517 BC072147 X. laevis.L
NM_001091927 X. laevis.L
xfos2 AJ223509 X. laevis.S
XM_018250012 X. laevis.S
XM_018250014 X. laevis.S
XM_041584382 X. laevis.S
XM_041584383 X. laevis.S
XM_041584384 X. laevis.S

ESTs (54)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs26C17 CN085632 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA009m15 CR564772 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs28E24 CN087227 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TGas092j23 AL960515 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xtbs07M18 CN092963 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7689385 CX912790 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7646807 CX804521 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7670651 CX877620 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7650174 CX810709 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651049 CX811789 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:9013792 EL860149 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7662362 CX844979 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7787688 CX332710 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7670212 CX877221 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xthr34K20 CN109826 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7627053 CX380665 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8855406 EL817677 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7611778 CX403854 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA053a05 CR443132 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT5174 CX414108 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7738527 DN026773 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7690194 CX914514 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs02D14 CN073011 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA048l10 CR448881 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs11L03 CN076274 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7029314 CF781422 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7650174 CX810708 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas092j23 BX752909 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA048l10 CR448882 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA009m15 CR564773 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7787688 CX332709 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627053 CX380664 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611778 CX403853 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT5174 CX414107 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs11L03 CN076273 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26C17 CN085631 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs28E24 CN087226 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs07M18 CN092962 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7662362 CX844978 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7670212 CX877220 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670651 CX877619 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7689385 CX912789 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690194 CX914513 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7738527 DN026772 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8855406 EL817678 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr34K20 CN109825 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:9013792 EL860150 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6935265 CB942850 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6862452 CA986221 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl279o09 DC117515 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8534441 EB471413 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:6863440 CA986908 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8545160 EB465646 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
rxl279o09 DC082815 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15