Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (135) Proteins (31) Interactants (20) Wiki
XB-GENEPAGE-491874

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ssna1 - All

Models - Gene (24)
Models - mRNA (24)
mRNAs (5)
ESTs (66)

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g34133 X. laevis.L
NCBI 10.0 XBXT10g006442 X. tropicalis
Xenbase 9.2 gene2279 X. laevis.L
Xenbase 9.1 gene29111 X. tropicalis
JGI 9.1 Xelaev18038136m.g X. laevis.L
JGI 8.0 Xetrov14031877m.g X. tropicalis
JGI 7.2 Xelaev16007831m.g X. laevis.L
JGI 7.1 Xetro.K04929 X. tropicalis
JGI 6.0 XeXenL6RMv10007745m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_3660003 X. tropicalis
ENSEMBL 4.1 ENSXETG00000028082 X. tropicalis
JGI 4.1 e_gw1.366.101.1 X. tropicalis
JGI 4.1 e_gw1.366.114.1 X. tropicalis
JGI 4.1 e_gw1.366.33.1 X. tropicalis
JGI 4.1 gw1.366.101.1 X. tropicalis
JGI 4.1 gw1.366.114.1 X. tropicalis
JGI 4.1 gw1.366.33.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3660011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660114 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3660019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_366000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_366000003 X. tropicalis

Models - mRNA (24)

Source Version Model Species
NCBI 10.1 XBmRNA64388 X. laevis.L
NCBI 10.0 mRNA031828 X. tropicalis
Xenbase 9.2 rna6624 X. laevis.L
JGI 9.1 Xelaev18038136m X. laevis.L
Xenbase 9.1 rna56124 X. tropicalis
JGI 8.0 Xetrov14031877m X. tropicalis
JGI 7.2 Xelaev16007831m X. laevis.L
JGI 7.1 Xetro.K04929.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007745m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_3660003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000058267 X. tropicalis
JGI 4.1 e_gw1.366.101.1 X. tropicalis
JGI 4.1 e_gw1.366.114.1 X. tropicalis
JGI 4.1 e_gw1.366.33.1 X. tropicalis
JGI 4.1 gw1.366.101.1 X. tropicalis
JGI 4.1 gw1.366.114.1 X. tropicalis
JGI 4.1 gw1.366.33.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3660011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3660114 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3660019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_366000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_366000003 X. tropicalis

mRNAs (5)

Clone Accession Species Library Anatomy Stage
NM_001016957 X. tropicalis
TGas117f05 CR761461 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7610221 BC135315 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5512911 BC073358 X. laevis.L
NM_001092328 X. laevis.L

ESTs (66)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas002d17 AL595015 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047n07 AL651062 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas117f05 AL961824 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas134n03 AL964621 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu080g23 AL775899 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089e13 AL781436 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083m04 AL785340 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA026j16 BX719743 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr03L17 CN120125 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr19J20 CN101840 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr02C21 CN106722 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr46C18 CN117308 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA080c13 CR441224 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7631579 CX397176 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601863 CX364903 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610221 CX376728 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7530424 CX419530 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7518619 CX750648 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7848936 DT534830 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7845733 DT527888 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
st75m19 DC185426 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st102k17 DC191195 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st107a10 DC193709 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st107b10 DC193719 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st24a12 DC169981 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25m05 DC170443 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8936038 EL638091 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8935287 EL636566 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
TGas117f05 BX753215 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu080g23 BX695210 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083m04 BX692427 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089e13 BX693750 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr19J20 CN101839 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr02C21 CN106721 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr03L17 CN113610 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr46C18 CN117307 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA080c13 CR441225 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7631579 CX397175 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601863 CX364902 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845733 DT527887 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7848936 DT534829 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
rst25m05 DC140280 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst24a12 DC139816 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst26m05 DC140571 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst75m19 DC155306 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst102k17 DC161213 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst107a10 DC163036 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst107b10 DC163051 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst76m19 DC155580 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8936038 EL638090 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
XENOPUS_SOURCE_ID:xlnoc003f12 AW200001 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:4678255 BI477766 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0057D08 AW637331 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0061D09 AW637689 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGp998C198088 BX852948 5' X. laevis.L Soares NXEG egg unfertilized egg stage
XL401j04ex BP675675 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7298623 CO384791 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
xlk116p10ex DC041017 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl280d04 DC117605 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XENOPUS_SOURCE_ID:xlnoc003f12 AW199049 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3301962 BF072054 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678255 BI445737 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3749330 BG022050 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL401j04ex BP713121 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk116p10ex DC008110 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl280d04 DC082898 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15