Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (13) Nucleotides (119) Proteins (38) Interactants (19) Wiki
XB-GENEPAGE-5839499

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ahdc1 - All

RefSeq mRNAs(3)
Models - Gene (20)
Models - mRNA (23)
mRNAs (8)
ESTs (35)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_031896888 XM_031896888.1 XP_031752748.1 AT-hook DNA-binding motif-containing protein 1 6007 bp XP_031752748 X. tropicalis
XM_018246427 XM_018246427.2 AT-hook DNA-binding motif-containing protein 1 5967 bp XP_018101916 X. laevis.L
XM_018249452 XM_018249452.2 AT-hook DNA-binding motif-containing protein 1 6017 bp XP_018104941 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g9947 X. laevis.S
NCBI 10.1 XBXL10_1g6919 X. laevis.L
NCBI 10.0 XBXT10g012653 X. tropicalis
ENSEMBL 10.0 ahdc1 X. tropicalis
Xenbase 9.2 gene42451 X. laevis.L
Xenbase 9.2 gene50366 X. laevis.S
JGI 9.1 Xelaev18015083m.g X. laevis.S
JGI 9.1 Xelaev18012095m.g X. laevis.L
Xenbase 9.1 gene30531 X. tropicalis
ENSEMBL 9.1 ahdc1 X. tropicalis
JGI 8.0 Xetrov14008269m.g X. tropicalis
JGI 7.2 Xelaev16077199m.g X. laevis.L
JGI 7.1 Xetro.B00030 X. tropicalis
JGI 6.0 XeXenL6RMv10001773m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018716 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060217 X. tropicalis
JGI 4.1 e_gw1.106.222.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_106000088 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1060063 X. tropicalis
JGI 4.1 gw1.106.222.1 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA18577 X. laevis.S
NCBI 10.1 XBmRNA12952 X. laevis.L
ENSEMBL 10.0 ENSXETT00000040553 X. tropicalis
NCBI 10.0 mRNA062698 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065499 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122209 X. tropicalis
Xenbase 9.2 rna85352 X. laevis.L
Xenbase 9.2 rna96847 X. laevis.S
Xenbase 9.1 rna58419 X. tropicalis
JGI 9.1 Xelaev18015083m X. laevis.S
JGI 9.1 Xelaev18012095m X. laevis.L
ENSEMBL 9.1 ENSXETT00000065499 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040553 X. tropicalis
JGI 8.0 Xetrov14008269m X. tropicalis
JGI 7.2 Xelaev16077199m X. laevis.L
JGI 7.1 Xetro.B00030.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001773m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1060217 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_106000088 X. tropicalis
JGI 4.1 e_gw1.106.222.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040553 X. tropicalis
JGI 4.1 gw1.106.222.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1060063 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_031896888 X. tropicalis
XR_004221303 X. tropicalis
XR_004221304 X. tropicalis
XR_004221305 X. tropicalis
IMAGE:6318593 BC068916 X. laevis.L
XM_018246427 X. laevis.L
XR_001934384 X. laevis.L
XM_018249452 X. laevis.S

ESTs (35)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs22N22 CN083626 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7629128 CX383393 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9016262 EL863227 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887837 EL845972 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st40j11 DC176865 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8872049 EL699200 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7093407 CK662585 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8853983 EL815851 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7651827 CX813181 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649819 CX809900 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645474 CX802537 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8872049 EL699199 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7512327 CX740652 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7629128 CX383392 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs22N22 CN083625 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7645474 CX802536 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8887837 EL845973 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9016262 EL863228 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL062e24 BJ059344 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105g06 BJ067976 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5543518 BQ733656 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL098k04 BJ072450 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk156p12ex DC063120 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5155326 CA789847 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL198m06 BJ621816 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0089H10 AW640030 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL189n08 BJ619607 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL103b22 BJ057778 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk105g24ex DC004469 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL198m06 BJ638508 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189n08 BJ636241 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL105g06 BJ085273 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098k04 BJ089468 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103b22 BJ075616 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL062e24 BJ077852 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25