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Summary Expression Phenotypes Gene Literature (18) GO Terms (12) Nucleotides (198) Proteins (91) Interactants (257) Wiki
XB-GENEPAGE-5857401

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for gtf2ird1 - All

Models - Gene (26)
Models - mRNA (38)
mRNAs (22)
ESTs (64)

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g003023 X. tropicalis
NCBI 10.1 XBXL10_1g10316 X. laevis.S
NCBI 10.1 XBXL10_1g7595 X. laevis.L
ENSEMBL 10.0 gtf2ird1 X. tropicalis
JGI 9.1 Xelaev18015389m.g X. laevis.S
JGI 9.1 Xelaev18012797m.g X. laevis.L
Xenbase 9.1 gene27908 X. tropicalis
Xenbase 9.2 gene6318 X. laevis.S
Xenbase 9.2 gene666 X. laevis.L
ENSEMBL 9.1 gtf2ird1 X. tropicalis
JGI 7.1 Xetro.B00649 X. tropicalis
JGI 7.2 Xelaev16018778m.g X. laevis.S
JGI 6.0 XeXenL6RMv10046710m.g X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_230021 X. tropicalis
JGI 4.1 e_gw1.23.167.1 X. tropicalis
JGI 4.1 e_gw1.23.20.1 X. tropicalis
JGI 4.1 e_gw1.23.29.1 X. tropicalis
JGI 4.1 gw1.23.167.1 X. tropicalis
JGI 4.1 gw1.23.20.1 X. tropicalis
JGI 4.1 gw1.23.29.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_230051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230167 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_230079 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_23000080 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_23000022 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA015371 X. tropicalis
NCBI 10.1 XBmRNA14258 X. laevis.L
NCBI 10.1 XBmRNA19275 X. laevis.S
ENSEMBL 10.0 ENSXETT00000065540 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092310 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121227 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116335 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119493 X. tropicalis
JGI 9.1 Xelaev18012797m X. laevis.L
JGI 9.1 Xelaev18015389m X. laevis.S
Xenbase 9.1 rna54190 X. tropicalis
Xenbase 9.2 rna1945 X. laevis.L
Xenbase 9.2 rna18470 X. laevis.S
ENSEMBL 9.1 ENSXETT00000092310 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065540 X. tropicalis
JGI 7.1 Xetro.B00649.2 X. tropicalis
JGI 7.1 Xetro.B00649.3 X. tropicalis
JGI 7.1 Xetro.B00649.4 X. tropicalis
JGI 7.1 Xetro.B00649.5 X. tropicalis
JGI 7.1 Xetro.B00649.6 X. tropicalis
JGI 7.1 Xetro.B00649.7 X. tropicalis
JGI 7.1 Xetro.B00649.8 X. tropicalis
JGI 7.1 Xetro.B00649.1 X. tropicalis
JGI 7.2 Xelaev16018778m X. laevis.S
JGI 6.0 XeXenL6RMv10046710m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_230021 X. tropicalis
JGI 4.1 e_gw1.23.167.1 X. tropicalis
JGI 4.1 e_gw1.23.20.1 X. tropicalis
JGI 4.1 e_gw1.23.29.1 X. tropicalis
JGI 4.1 gw1.23.167.1 X. tropicalis
JGI 4.1 gw1.23.20.1 X. tropicalis
JGI 4.1 gw1.23.29.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_230051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230167 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_230079 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_23000080 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_23000022 X. tropicalis

mRNAs (22)

Clone Accession Species Library Anatomy Stage
XM_002932292 X. tropicalis
XM_004911708 X. tropicalis
XM_012957548 X. tropicalis
XM_004911706 X. tropicalis
XM_018091602 X. tropicalis
AF482757 X. laevis.S
NM_001088781 X. laevis.S
IMAGE:9041469 BC169835 X. laevis.S
XM_018246965 X. laevis.L
XM_018246964 X. laevis.L
XM_018246963 X. laevis.L
XM_018246962 X. laevis.L
XM_018248132 X. laevis.S
XM_018248131 X. laevis.S
XM_018248129 X. laevis.S
XM_018248128 X. laevis.S
XM_018248127 X. laevis.S
XM_018248126 X. laevis.S
XM_041582272 X. laevis.L
XM_041582271 X. laevis.L
XM_041582270 X. laevis.L
XM_041583027 X. laevis.S

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs07I23 CN092749 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st44j04 DC177793 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st43j04 DC177532 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st42p22 DC177388 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st42o22 DC177373 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st42j04 DC177293 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25k22 DC170421 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7636247 CX406297 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633912 CX375692 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN12269 CX928839 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7531614 CX421307 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566447 CX483576 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7748232 DN044613 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7721208 CX996613 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7664137 CX848128 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7654823 CX824335 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653900 CX823169 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7513137 CX741858 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTbA062j15 CR423183 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04C17 CN120250 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04C17 CN117561 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu067d09 AL800700 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076e24 AL782149 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu050e20 AL661750 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu015b11 AL635833 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs07I23 CN092748 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst44j04 DC147502 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst43j04 DC147251 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst42p22 DC147104 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst42o22 DC147092 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst42j04 DC147009 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst5h21 DC144238 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst25k22 DC140260 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7845860 DT529188 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAN12269 CX928838 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654823 CX824334 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7748232 DN044612 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7721208 CX996612 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7653900 CX823168 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7513137 CX741857 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7566447 CX483575 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7608367 CX408885 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636247 CX406296 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633912 CX375691 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790330 CX323942 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA055m12 CR434008 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA029i17 CR419660 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04C17 CN117560 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA036n11 BX717005 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu076e24 BX685666 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl328a07 DC131446 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk140i19ex DC048665 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL214d20 BJ626249 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166k06 BJ614111 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL106n01 BJ068473 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4677807 BI314901 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0144A09 AW644842 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk140i19ex DC015402 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL214h18 BJ642705 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL214d20 BJ642637 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL167k06 BJ631017 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166k06 BJ630776 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL106n01 BJ085710 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0004E07 AW633168 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage