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Summary Expression Phenotypes Gene Literature (0) GO Terms (44) Nucleotides (93) Proteins (42) Interactants (120) Wiki
XB-GENEPAGE-5871493

Show:     All X. tropicalis X. laevis

Nucleotide sequences for traf3ip1 - All

RefSeq mRNAs(5)
Models - Gene (19)
Models - mRNA (25)
mRNAs (8)
ESTs (25)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001171521 NM_001171521.1 TRAF3-interacting protein 1 4940 bp NP_001164992 X. tropicalis
XM_012970522 XM_012970522.3 TRAF3-interacting protein 1 isoform X1 5020 bp XP_012825976 X. tropicalis
XM_018238915 XM_018238915.2 TRAF3-interacting protein 1 isoform X1 2726 bp XP_018094404 X. laevis.S
XM_018238916 XM_018238916.2 TRAF3-interacting protein 1 isoform X2 2723 bp XP_018094405 X. laevis.S
XM_018236042 XM_018236042.2 TRAF3-interacting protein 1 3189 bp XP_018091531 X. laevis.L

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g43579 X. laevis.S
NCBI 10.1 XBXL10_1g40791 X. laevis.L
NCBI 10.0 XBXT10g012025 X. tropicalis
ENSEMBL 10.0 traf3ip1 X. tropicalis
Xenbase 9.2 gene17144 X. laevis.L
Xenbase 9.2 gene2844 X. laevis.S
Xenbase 9.1 gene6265 X. tropicalis
ENSEMBL 9.1 traf3ip1 X. tropicalis
JGI 7.1 Xetro.I00883 X. tropicalis
JGI 6.0 XeXenL6RMv10001337m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004877 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_15000013 X. tropicalis
JGI 4.1 gw1.15.197.1 X. tropicalis
JGI 4.1 e_gw1.15.197.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_15000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_15000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000059 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000060 X. tropicalis
JGI 4.1 C_scaffold_15000016 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA76830 X. laevis.L
NCBI 10.1 XBmRNA82005 X. laevis.S
ENSEMBL 10.0 ENSXETT00000030763 X. tropicalis
NCBI 10.0 mRNA059608 X. tropicalis
ENSEMBL 10.0 ENSXETT00000010584 X. tropicalis
Xenbase 9.2 rna8255 X. laevis.S
Xenbase 9.2 rna50073 X. laevis.L
ENSEMBL 9.1 ENSXETT00000030763 X. tropicalis
ENSEMBL 9.1 ENSXETT00000010584 X. tropicalis
Xenbase 9.1 rna20228 X. tropicalis
JGI 7.1 Xetro.I00883.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001337m X. laevis.S
JGI 4.1 gw1.15.197.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000059 X. tropicalis
JGI 4.1 e_gw1.15.197.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010583 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010584 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010585 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030763 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053780 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_15000010 X. tropicalis
JGI 4.1 C_scaffold_15000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_15000060 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_15000013 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_15000005 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7657883 BC118722 X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654873 BC167570 X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas017e21 CR855727 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001171521 X. tropicalis
XM_012970522 X. tropicalis
XM_018238915 X. laevis.S
XM_018238916 X. laevis.S
XM_018236042 X. laevis.L

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas017e21 AL633640 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st2g02 DC171793 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st98o15 DC192467 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st99o15 DC192702 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7526468 CX443909 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537487 CX446374 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540798 CX462281 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556888 CX505139 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu066b03 AL778414 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7645803 CX802834 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7654873 CX824351 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657883 CX829943 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7690845 CX915436 5' X. tropicalis NIH_XGC_tropTe4 testis frog
rst98o15 DC162488 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu066b03 BX687318 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7645803 CX802833 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7657883 CX829942 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7556888 CX505138 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7690845 CX915435 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654873 CX824350 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7537487 CX446373 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540798 CX462280 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8738849 EE300645 5' X. laevis.S NICHD_XGC_panc pancreas frog
XL086b03 BJ066417 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086b03 BJ083738 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25