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Summary Expression Phenotypes Gene Literature (1) GO Terms (57) Nucleotides (161) Proteins (91) Interactants (122) Wiki
XB-GENEPAGE-5875738

Show:     All X. tropicalis X. laevis

Nucleotide sequences for capn3 - All

RefSeq mRNAs(18)
Models - Gene (30)
Models - mRNA (47)
mRNAs (19)
ESTs (11)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
XM_002935335 XM_002935335.5 calpain-3 isoform X1 2987 bp XP_002935381 X. tropicalis
XM_004917239 XM_004917239.4 calpain-3 isoform X2 2966 bp XP_004917296 X. tropicalis
XM_012969294 XM_012969294.3 calpain-3 isoform X5 2855 bp XP_012824748 X. tropicalis
XM_031890823 XM_031890823.1 XP_031746683.1 calpain-3 isoform X3 2965 bp XP_031746683 X. tropicalis
XM_031890824 XM_031890824.1 XP_031746684.1 calpain-3 isoform X4 2861 bp XP_031746684 X. tropicalis
XM_031890825 XM_031890825.1 XP_031746685.1 calpain-3 isoform X6 2833 bp XP_031746685 X. tropicalis
XM_031890826 XM_031890826.1 XP_031746686.1 calpain-3 isoform X7 2707 bp XP_031746686 X. tropicalis
NM_001105269 NM_001105269.1 calpain 3 L homeolog 1318 bp NP_001098739 X. laevis.L
XM_018228493 XM_018228493.2 calpain 3 L homeolog isoform X3 2464 bp XP_018083982 X. laevis.L
XM_018228495 XM_018228495.2 calpain 3 L homeolog isoform X4 1340 bp XP_018083984 X. laevis.L
XM_018228497 XM_018228497.2 calpain 3 L homeolog isoform X1 2960 bp XP_018083986 X. laevis.L
XM_018228498 XM_018228498.1 calpain 3 L homeolog isoform X2 2827 bp XP_018083987 X. laevis.L
XM_041574837 XM_041574837.1 XP_041430771.1 calpain-3 isoform X1 2818 bp XP_041430771 X. laevis.S
XM_041574838 XM_041574838.1 XP_041430772.1 calpain-3 isoform X2 2713 bp XP_041430772 X. laevis.S
XM_041574839 XM_041574839.1 XP_041430773.1 calpain-3 isoform X3 2692 bp XP_041430773 X. laevis.S
XM_041574840 XM_041574840.1 XP_041430774.1 calpain-3 isoform X4 2690 bp XP_041430774 X. laevis.S
XM_041574841 XM_041574841.1 XP_041430775.1 calpain-3 isoform X5 2564 bp XP_041430775 X. laevis.S
XM_041574842 XM_041574842.1 XP_041430776.1 calpain-3 isoform X6 765 bp XP_041430776 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g37137 X. laevis.S
NCBI 10.1 XBXL10_1g36117 X. laevis.L
NCBI 10.0 XBXT10g006510 X. tropicalis
ENSEMBL 10.0 capn3 X. tropicalis
Xenbase 9.2 gene19856 X. laevis.L
JGI 9.1 Xelaev18041044m.g X. laevis.S
JGI 9.1 Xelaev18039947m.g X. laevis.L
Xenbase 9.1 gene31444 X. tropicalis
ENSEMBL 9.1 capn3 X. tropicalis
JGI 8.0 Xetrov14035333m.g X. tropicalis
JGI 7.2 Xelaev16035640m.g X. laevis.L
JGI 7.1 Xetro.H01719 X. tropicalis
JGI 6.0 XeXenL6RMv10031541m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012304 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_145000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000039 X. tropicalis
JGI 4.1 gw1.145.11.1 X. tropicalis
JGI 4.1 gw1.145.51.1 X. tropicalis
JGI 4.1 gw1.145.81.1 X. tropicalis
JGI 4.1 e_gw1.145.11.1 X. tropicalis
JGI 4.1 e_gw1.145.51.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450080 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450021 X. tropicalis
JGI 4.1 e_gw1.145.81.1 X. tropicalis

mRNAs based on gene models(47)

Source Version Model Species
NCBI 10.1 XBmRNA70045 X. laevis.S
NCBI 10.1 XBmRNA68357 X. laevis.L
NCBI 10.0 mRNA032148 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094368 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095469 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071121 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096253 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082658 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087454 X. tropicalis
ENSEMBL 10.0 ENSXETT00000026925 X. tropicalis
Xenbase 9.2 rna57988 X. laevis.L
ENSEMBL 9.1 ENSXETT00000026925 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068003 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071121 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082658 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087454 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094368 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095469 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096253 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101309 X. tropicalis
Xenbase 9.1 rna59778 X. tropicalis
JGI 9.1 Xelaev18039947m X. laevis.L
JGI 9.1 Xelaev18041044m X. laevis.S
JGI 8.0 Xetrov14035333m X. tropicalis
JGI 7.2 Xelaev16035640m X. laevis.L
JGI 7.1 Xetro.H01719.1 X. tropicalis
JGI 7.1 Xetro.H01719.2 X. tropicalis
JGI 7.1 Xetro.H01719.3 X. tropicalis
JGI 6.0 XeXenL6RMv10031541m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_145000021 X. tropicalis
JGI 4.1 gw1.145.11.1 X. tropicalis
JGI 4.1 gw1.145.51.1 X. tropicalis
JGI 4.1 gw1.145.81.1 X. tropicalis
JGI 4.1 e_gw1.145.11.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026925 X. tropicalis
JGI 4.1 e_gw1.145.81.1 X. tropicalis
JGI 4.1 e_gw1.145.51.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450040 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450080 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000040 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
XM_002935335 X. tropicalis
XM_004917239 X. tropicalis
XM_012969294 X. tropicalis
XM_031890823 X. tropicalis
XM_031890824 X. tropicalis
XM_031890825 X. tropicalis
XM_031890826 X. tropicalis
IMAGE:8331755 BC123364 X. laevis.L
NM_001105269 X. laevis.L
XM_018228493 X. laevis.L
XM_018228495 X. laevis.L
XM_018228497 X. laevis.L
XM_018228498 X. laevis.L
XM_041574837 X. laevis.S
XM_041574838 X. laevis.S
XM_041574839 X. laevis.S
XM_041574840 X. laevis.S
XM_041574841 X. laevis.S
XM_041574842 X. laevis.S

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7854240 DT396260 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA043i20 CR434919 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7850537 DT388805 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8903605 EL794326 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7854240 DT396259 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7847584 DT531966 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8903605 EL794327 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TTbA043i20 CR434920 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7850537 DT388804 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8544996 EB466080 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
PBX0075G04 AW638882 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage