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Summary Expression Phenotypes Gene Literature (1) GO Terms (9) Nucleotides (419) Proteins (58) Interactants (62) Wiki
XB-GENEPAGE-5943529

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ythdf1 - All

RefSeq mRNAs(8)
Models - Gene (31)
Models - mRNA (34)
mRNAs (12)
ESTs (302)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_204061 NM_204061.1 YTH domain-containing family protein 1 2307 bp NP_989392 X. tropicalis
XM_031894016 XM_031894016.1 XP_031749876.1 YTH domain-containing family protein 1 isoform X1 3166 bp XP_031749876 X. tropicalis
NM_001090010 NM_001090010.1 YTH N6-methyladenosine RNA binding protein F1 L homeolog 2710 bp NP_001083479 X. laevis.L
XM_018234191 XM_018234191.2 YTH N(6)-methyladenosine RNA binding protein 1 L homeolog isoform X1 2411 bp XP_018089680 X. laevis.L
XM_041575547 XM_041575547.1 XP_041431481.1 YTH N(6)-methyladenosine RNA binding protein 1 L homeolog isoform X2 2395 bp XP_041431481 X. laevis.L
XM_041575548 XM_041575548.1 XP_041431482.1 YTH N(6)-methyladenosine RNA binding protein 1 L homeolog isoform X3 2347 bp XP_041431482 X. laevis.L
XM_018238259 XM_018238259.2 YTH domain-containing family protein 1 isoform X1 3798 bp XP_018093748 X. laevis.S
XM_018238260 XM_018238260.2 YTH domain-containing family protein 1 isoform X2 3760 bp XP_018093749 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g39405 X. laevis.L
NCBI 10.1 XBXL10_1g42634 X. laevis.S
NCBI 10.0 XBXT10g011148 X. tropicalis
ENSEMBL 10.0 ythdf1 X. tropicalis
Xenbase 9.2 gene7750 X. laevis.L
Xenbase 9.2 gene34981 X. laevis.S
JGI 9.1 Xelaev18043576m.g X. laevis.L
JGI 9.1 Xelaev18046307m.g X. laevis.S
Xenbase 9.1 gene620 X. tropicalis
ENSEMBL 9.1 ythdf1 X. tropicalis
JGI 8.0 Xetrov14042532m.g X. tropicalis
JGI 7.2 Xelaev16010268m.g X. laevis.L
JGI 7.1 Xetro.K03581 X. tropicalis
JGI 6.0 XeXenL6RMv10030092m.g X. laevis.L
JGI 6.0 XeXenL6RMv10025161m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027086 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1469000004 X. tropicalis
JGI 4.1 gw1.1469.1.1 X. tropicalis
JGI 4.1 gw1.1469.24.1 X. tropicalis
JGI 4.1 gw1.1469.25.1 X. tropicalis
JGI 4.1 e_gw1.1469.1.1 X. tropicalis
JGI 4.1 e_gw1.1469.25.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_14690005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_14690004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_14690002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1469000001 X. tropicalis
JGI 4.1 e_gw1.1469.24.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1469000002 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA80149 X. laevis.S
NCBI 10.1 XBmRNA74268 X. laevis.L
ENSEMBL 10.0 ENSXETT00000056774 X. tropicalis
NCBI 10.0 mRNA055328 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120871 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085327 X. tropicalis
Xenbase 9.2 rna74723 X. laevis.S
Xenbase 9.2 rna22629 X. laevis.L
ENSEMBL 9.1 ENSXETT00000085327 X. tropicalis
ENSEMBL 9.1 ENSXETT00000056774 X. tropicalis
Xenbase 9.1 rna1928 X. tropicalis
JGI 9.1 Xelaev18043576m X. laevis.L
JGI 9.1 Xelaev18046307m X. laevis.S
JGI 8.0 Xetrov14042532m X. tropicalis
JGI 7.2 Xelaev16010268m X. laevis.L
JGI 7.1 Xetro.K03581.1 X. tropicalis
JGI 6.0 XeXenL6RMv10025161m X. laevis.L
JGI 6.0 XeXenL6RMv10030092m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1469000001 X. tropicalis
JGI 4.1 e_gw1.1469.24.1 X. tropicalis
JGI 4.1 e_gw1.1469.25.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056774 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_14690004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_14690002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_14690005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_14690025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1469000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1469000002 X. tropicalis
JGI 4.1 e_gw1.1469.1.1 X. tropicalis
JGI 4.1 gw1.1469.1.1 X. tropicalis
JGI 4.1 gw1.1469.24.1 X. tropicalis
JGI 4.1 gw1.1469.25.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:5379253 BC064856 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas119a18 CR761754 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_204061 X. tropicalis
XM_031894016 X. tropicalis
IMAGE:5537337 BC049392 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4030598 BC060445 X. laevis.L
NM_001090010 X. laevis.L
XM_018234191 X. laevis.L
XM_041575547 X. laevis.L
XM_041575548 X. laevis.L
XM_018238259 X. laevis.S
XM_018238260 X. laevis.S

ESTs (302)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9011672 EL856760 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu004e24 AL640104 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu003e23 AL639835 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382718 BQ393855 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7696367 CX925461 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691810 CX917944 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6977870 CF224999 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7690921 CX915646 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas006l05 AL595594 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025h05 AL627746 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas022p11 AL627873 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021o04 AL632992 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas030p01 AL647152 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080l13 AL774891 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098o07 AL964876 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096l13 AL969586 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115j19 AL970137 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6987546 CF221076 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6986893 CF221668 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas119a18 AL970367 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103k12 AL971347 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5382352 BQ393492 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
st10g15 DC165717 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15d15 DC167151 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20b18 DC168836 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21g11 DC169213 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30d24 DC172036 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st36c24 DC173637 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4a09 DC174148 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68h21 DC183565 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st76p05 DC185730 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79b02 DC186260 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st87j11 DC188339 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st89m08 DC188870 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100o13 DC190813 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st113a09 DC194897 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st112m12 DC195347 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5379797 BQ524325 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7576650 CX422234 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529943 CX426751 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540488 CX461788 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562800 CX467651 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550532 CX509603 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8859890 EL847255 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8918928 EL832937 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8931912 EL667145 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:5335347 BQ520373 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8884220 EL840075 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5379253 BQ522831 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8956042 EL658488 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8946993 EL652871 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8945942 EG652690 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
CAAO7835 CX941730 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7687307 CX909113 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7669430 CX875784 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663822 CX848250 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662703 CX845024 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9008716 EL809627 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7596711 DR891285 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787786 CX332725 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640112 CX315318 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA061m17 BX731809 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr01K01 CN119327 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr17H24 CN100509 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA033k07 CR447129 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA029i07 CR419816 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu114g24 AL787496 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu059o02 AL675515 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu057m14 AL675423 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu035i07 AL656188 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335347 BQ520372 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977870 CF224998 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379253 BQ522830 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
rst21g11 DC139033 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst30d24 DC141733 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8918928 EL832938 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:5379797 BQ524324 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:4440824 BG514972 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4461764 BG816679 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4462341 BG885513 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
CAAO7835 CX941729 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7690921 CX915645 3' X. tropicalis NIH_XGC_tropTe4 testis frog
rst36c24 DC143382 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7687307 CX909112 3' X. tropicalis NIH_XGC_tropTe4 testis frog
rst37c24 DC145610 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst68h21 DC153366 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7663822 CX848249 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
rst76p05 DC155619 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7662703 CX845023 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9008716 EL809628 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst79b02 DC156168 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst87j11 DC158231 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7596711 DR891284 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst89m08 DC158772 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst100o13 DC160826 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst112m12 DC165271 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9011672 EL856761 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7576650 CX422233 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr17H24 CN100508 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36