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Summary Expression Phenotypes Gene Literature (1) GO Terms (21) Nucleotides (96) Proteins (49) Interactants (20) Wiki
XB-GENEPAGE-6035038

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trim71 - All

RefSeq mRNAs(12)
Models - Gene (23)
Models - mRNA (25)
mRNAs (12)
ESTs (22)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_002937846 XM_002937846.5 E3 ubiquitin-protein ligase TRIM71 isoform X3 9184 bp XP_002937892 X. tropicalis
XM_004915372 XM_004915372.4 E3 ubiquitin-protein ligase TRIM71 isoform X1 9253 bp XP_004915429 X. tropicalis
XM_004915373 XM_004915373.4 E3 ubiquitin-protein ligase TRIM71 isoform X2 9235 bp XP_004915430 X. tropicalis
XM_018267476 XM_018267476.2 E3 ubiquitin-protein ligase TRIM71 isoform X1 4328 bp XP_018122965 X. laevis.L
XM_018267476 E3 ubiquitin-protein ligase TRIM71 isoform X1 4328 bp XP_018122965 X. laevis.L
XM_018267478 XM_018267478.2 E3 ubiquitin-protein ligase TRIM71 isoform X2 4312 bp XP_018122967 X. laevis.L
XM_018267478 E3 ubiquitin-protein ligase TRIM71 isoform X2 4312 bp XP_018122967 X. laevis.L
XM_018267479 XM_018267479.2 E3 ubiquitin-protein ligase TRIM71 isoform X3 4262 bp XP_018122968 X. laevis.L
XM_018267479 E3 ubiquitin-protein ligase TRIM71 isoform X3 4262 bp XP_018122968 X. laevis.L
XM_018269303 XM_018269303.2 E3 ubiquitin-protein ligase TRIM71 isoform X1 5012 bp XP_018124792 X. laevis.S
XM_018269304 XM_018269304.2 E3 ubiquitin-protein ligase TRIM71 isoform X2 4995 bp XP_018124793 X. laevis.S
XM_018269305 XM_018269305.2 E3 ubiquitin-protein ligase TRIM71 isoform X3 4945 bp XP_018124794 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g29030 X. laevis.S
NCBI 10.1 XBXL10_1g27193 X. laevis.L
NCBI 10.0 XBXT10g012852 X. tropicalis
ENSEMBL 10.0 trim71 X. tropicalis
Xenbase 9.2 gene316 X. laevis.S
JGI 9.1 Xelaev18033154m.g X. laevis.S
JGI 9.1 Xelaev18031095m.g X. laevis.L
Xenbase 9.1 gene15979 X. tropicalis
JGI 7.1 Xetro.F01242 X. tropicalis
JGI 6.0 XeXenL6RMv10000704m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005362 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_320000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200006 X. tropicalis
JGI 4.1 e_gw1.320.29.1 X. tropicalis
JGI 4.1 e_gw1.320.3.1 X. tropicalis
JGI 4.1 e_gw1.320.88.1 X. tropicalis
JGI 4.1 gw1.320.29.1 X. tropicalis
JGI 4.1 gw1.320.3.1 X. tropicalis
JGI 4.1 gw1.320.88.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3200004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3200003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_320000006 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA54614 X. laevis.S
NCBI 10.1 XBmRNA50907 X. laevis.L
ENSEMBL 10.0 ENSXETT00000111804 X. tropicalis
NCBI 10.0 mRNA063623 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112162 X. tropicalis
Xenbase 9.2 rna904 X. laevis.S
Xenbase 9.1 rna35341 X. tropicalis
JGI 9.1 Xelaev18033154m X. laevis.S
JGI 9.1 Xelaev18031095m X. laevis.L
JGI 7.1 Xetro.F01242.1 X. tropicalis
JGI 6.0 XeXenL6RMv10000704m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_3200003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3200006 X. tropicalis
JGI 4.1 e_gw1.320.88.1 X. tropicalis
JGI 4.1 e_gw1.320.3.1 X. tropicalis
JGI 4.1 e_gw1.320.29.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033413 X. tropicalis
ENSEMBL 4.1 ENSXETT00000011768 X. tropicalis
JGI 4.1 gw1.320.88.1 X. tropicalis
JGI 4.1 gw1.320.29.1 X. tropicalis
JGI 4.1 gw1.320.3.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_320000003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3200029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_320000006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3200004 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
XM_002937846 X. tropicalis
XM_004915372 X. tropicalis
XM_004915373 X. tropicalis
XM_018267476 X. laevis.L
XM_018267476 X. laevis.L
XM_018267478 X. laevis.L
XM_018267478 X. laevis.L
XM_018267479 X. laevis.L
XM_018267479 X. laevis.L
XM_018269303 X. laevis.S
XM_018269304 X. laevis.S
XM_018269305 X. laevis.S

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu077m04 BX683347 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077m04 AL777889 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069a24 AL779301 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu086c22 AL791864 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7559524 CX514795 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu046h07 AL658877 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7574189 CX440361 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu135e08 AL796662 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas052k09 AL675737 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas052k09 BX747799 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu069a24 BX687270 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7559524 CX514794 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xlk8c06ex DC061956 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl270b02 DC114751 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl283o02 DC118587 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL439l19ex BP682107 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4930790 BQ731878 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL055k10 BJ070134 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl270b02 DC079865 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL055k10 BJ087171 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk8c06ex DC028428 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL439l19ex BP718465 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5