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Summary Expression Phenotypes Gene Literature (7) GO Terms (15) Nucleotides (59) Proteins (21) Interactants (237) Wiki
XB-GENEPAGE-6050973

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trabd2a - All

RefSeq mRNAs(3)
Models - Gene (14)
Models - mRNA (14)
mRNAs (10)
ESTs (16)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001282491 NM_001282491.1 metalloprotease TIKI1 precursor 2513 bp NP_001269420 X. tropicalis
XM_031896758 XM_031896758.1 XP_031752618.1 metalloprotease TIKI1 isoform X1 2468 bp XP_031752618 X. tropicalis
XM_018256864 XP_018112353.1 metalloprotease TIKI1 2729 bp XP_018112353 X. laevis.L

Models - Gene (14)

Source Version Model Species
NCBI 10.0 XBXT10g018370 X. tropicalis
JGI 6.0 XeXenL6RMv10008707m.g X. laevis.S
NCBI 10.1 XBXL10_1g1875 X. laevis.L
ENSEMBL 10.0 trabd2a X. tropicalis
Xenbase 9.1 gene477 X. tropicalis
ENSEMBL 9.1 trabd2b X. tropicalis
JGI 7.1 Xetro.A02274 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020092 X. tropicalis
JGI 4.1 e_gw1.202.92.1 X. tropicalis
JGI 4.1 gw1.202.19.1 X. tropicalis
JGI 4.1 gw1.202.92.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2020039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020019 X. tropicalis
JGI 4.1 e_gw1.202.19.1 X. tropicalis

mRNAs based on gene models(14)

Source Version Model Species
NCBI 10.1 XBmRNA3351 X. laevis.L
ENSEMBL 10.0 ENSXETT00000028687 X. tropicalis
NCBI 10.0 mRNA090673 X. tropicalis
Xenbase 9.1 rna1474 X. tropicalis
ENSEMBL 9.1 ENSXETT00000028687 X. tropicalis
JGI 7.1 Xetro.A02274.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008707m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_2020039 X. tropicalis
JGI 4.1 e_gw1.202.92.1 X. tropicalis
JGI 4.1 e_gw1.202.19.1 X. tropicalis
JGI 4.1 gw1.202.92.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020092 X. tropicalis
JGI 4.1 gw1.202.19.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2020019 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
AL647003 X. tropicalis
BX735424 X. tropicalis
CR449693 X. tropicalis
CR567358 X. tropicalis
CR567359 X. tropicalis
CX439581 X. tropicalis
JQ653417 X. tropicalis
NM_001282491 X. tropicalis
XM_031896758 X. tropicalis
XM_018256864 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7524698 CX439581 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu058i22 AL677875 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA070i03 CR449692 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA003p10 CR560399 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA027f13 CR567358 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA067b05 BX735423 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA070i03 CR449693 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7555705 CX502958 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA067b05 BX735424 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XL053j11 BJ069552 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk135h10ex DC047009 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL031l04 BJ035029 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk126h10ex DC010964 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk135h10ex DC013801 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL053j11 BJ086610 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL031l04 BJ051406 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15