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Summary Expression Phenotypes Gene Literature (2) GO Terms (16) Nucleotides (138) Proteins (50) Interactants (289) Wiki
XB-GENEPAGE-942164

Show:     All X. tropicalis X. laevis

Nucleotide sequences for prtfdc1 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (40)
mRNAs (5)
ESTs (30)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001102892 NM_001102892.1 phosphoribosyltransferase domain-containing protein 1 917 bp NP_001096362 X. tropicalis
XM_018094511 XM_018094511.2 phosphoribosyltransferase domain-containing protein 1 isoform X1 1210 bp XP_017950000 X. tropicalis
NM_001093591 NM_001093591.1 phosphoribosyltransferase domain-containing protein 1 967 bp NP_001087060 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g26869 X. laevis.L
NCBI 10.0 XBXT10g001711 X. tropicalis
ENSEMBL 10.0 prtfdc1 X. tropicalis
Xenbase 9.2 gene18103 X. laevis.L
JGI 9.1 Xelaev18030772m.g X. laevis.L
Xenbase 9.1 gene3878 X. tropicalis
ENSEMBL 9.1 prtfdc1 X. tropicalis
JGI 8.0 Xetrov14027644m.g X. tropicalis
JGI 7.2 Xelaev16016221m.g X. laevis.L
JGI 7.1 Xetro.F01569 X. tropicalis
JGI 6.0 XeXenL6RMv10000897m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005902 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470043 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_47000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_47000014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_470014 X. tropicalis
JGI 4.1 e_gw1.47.14.1 X. tropicalis
JGI 4.1 e_gw1.47.208.1 X. tropicalis
JGI 4.1 e_gw1.47.245.1 X. tropicalis
JGI 4.1 gw1.47.14.1 X. tropicalis
JGI 4.1 gw1.47.208.1 X. tropicalis
JGI 4.1 gw1.47.245.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_470032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470208 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470245 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_470012 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA50288 X. laevis.L
ENSEMBL 10.0 ENSXETT00000012987 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099614 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081642 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112998 X. tropicalis
NCBI 10.0 mRNA008575 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104100 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066094 X. tropicalis
Xenbase 9.2 rna52908 X. laevis.L
ENSEMBL 9.1 ENSXETT00000081642 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099614 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104100 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012987 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066094 X. tropicalis
Xenbase 9.1 rna12656 X. tropicalis
JGI 9.1 Xelaev18030772m X. laevis.L
JGI 8.0 Xetrov14027644m X. tropicalis
JGI 7.2 Xelaev16016221m X. laevis.L
JGI 7.1 Xetro.F01569.1 X. tropicalis
JGI 7.1 Xetro.F01569.2 X. tropicalis
JGI 6.0 XeXenL6RMv10000897m X. laevis.L
JGI 4.1 estExt_Genewise1.C_470014 X. tropicalis
JGI 4.1 e_gw1.47.208.1 X. tropicalis
JGI 4.1 e_gw1.47.245.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012987 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_470012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_470043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_470014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_470032 X. tropicalis
JGI 4.1 e_gw1.47.14.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470208 X. tropicalis
JGI 4.1 estExt_Genewise1.C_470245 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_47000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_47000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_47000014 X. tropicalis
JGI 4.1 gw1.47.14.1 X. tropicalis
JGI 4.1 gw1.47.208.1 X. tropicalis
JGI 4.1 gw1.47.245.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7632311 BC135868 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001102892 X. tropicalis
XM_018094511 X. tropicalis
IMAGE:5536432 BC077960 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093591 X. laevis.L

ESTs (30)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA046n24 CR449862 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8918360 EL832118 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7619515 DR897876 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632311 CX398361 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622139 CX342624 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7635548 CX339495 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA014g06 BX715188 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8918360 EL832119 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTbA046n24 CR449863 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA014g06 BX715189 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7622139 CX342623 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619515 CX346686 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632311 CX398360 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8917441 EL830855 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
XL217o07 BJ627384 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0137G03 AW644220 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0116G07 AW642352 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3431324 BG345523 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGp998G018084 BX854233 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6323544 CA971962 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL209c14 BJ624646 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5536432 CF288769 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3301075 BE132020 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0139F09 AW644392 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3300504 BE131734 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5536432 CF288768 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5162439 BQ398278 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:3301075 BE491014 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3300504 BE027109 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3431324 BG038237 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage