Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (18) Nucleotides (138) Proteins (45) Interactants (154) Wiki
XB-GENEPAGE-966696

Show:     All X. tropicalis X. laevis

Nucleotide sequences for stub1 - All

RefSeq mRNAs(3)
Models - Gene (32)
Models - mRNA (32)
mRNAs (5)
ESTs (53)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001078879 NM_001078879.1 E3 ubiquitin-protein ligase CHIP 2260 bp NP_001072347 X. tropicalis
XM_018236656 XM_018236656.1 E3 ubiquitin-protein ligase CHIP 2782 bp XP_018092145 X. laevis.L
XM_018239333 XM_018239333.2 E3 ubiquitin-protein ligase CHIP 2454 bp XP_018094822 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g44072 X. laevis.S
NCBI 10.1 XBXL10_1g41448 X. laevis.L
NCBI 10.0 XBXT10g014630 X. tropicalis
ENSEMBL 10.0 stub1 X. tropicalis
Xenbase 9.2 gene521 X. laevis.L
Xenbase 9.2 gene17422 X. laevis.S
JGI 9.1 Xelaev18047820m.g X. laevis.S
JGI 9.1 Xelaev18045589m.g X. laevis.L
Xenbase 9.1 gene16976 X. tropicalis
ENSEMBL 9.1 stub1 X. tropicalis
JGI 8.0 Xetrov14038922m.g X. tropicalis
JGI 7.2 Xelaev16080071m.g X. laevis.L
JGI 7.1 Xetro.I01606 X. tropicalis
JGI 6.0 XeXenL6RMv10015664m.g X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_174000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740124 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000004 X. tropicalis
JGI 4.1 e_gw1.174.124.1 X. tropicalis
JGI 4.1 e_gw1.174.18.1 X. tropicalis
JGI 4.1 e_gw1.174.229.1 X. tropicalis
JGI 4.1 gw1.174.124.1 X. tropicalis
JGI 4.1 gw1.174.18.1 X. tropicalis
JGI 4.1 gw1.174.229.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740229 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740001 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA82908 X. laevis.S
NCBI 10.1 XBmRNA78221 X. laevis.L
ENSEMBL 10.0 ENSXETT00000061675 X. tropicalis
NCBI 10.0 mRNA072349 X. tropicalis
Xenbase 9.2 rna50878 X. laevis.S
Xenbase 9.2 rna1480 X. laevis.L
Xenbase 9.1 rna36896 X. tropicalis
JGI 9.1 Xelaev18047820m X. laevis.S
JGI 9.1 Xelaev18045589m X. laevis.L
ENSEMBL 9.1 ENSXETT00000061675 X. tropicalis
JGI 8.0 Xetrov14038922m X. tropicalis
JGI 7.2 Xelaev16080071m X. laevis.L
JGI 7.1 Xetro.I01606.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015664m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1740018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740003 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740002 X. tropicalis
JGI 4.1 e_gw1.174.229.1 X. tropicalis
JGI 4.1 e_gw1.174.18.1 X. tropicalis
JGI 4.1 e_gw1.174.124.1 X. tropicalis
JGI 4.1 gw1.174.229.1 X. tropicalis
JGI 4.1 gw1.174.18.1 X. tropicalis
JGI 4.1 gw1.174.124.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_174000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740229 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740124 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7698919 BC121437 X. tropicalis NIH_XGC_tropTe5 testis frog
NM_001078879 X. tropicalis
IMAGE:7393399 BC108631 X. laevis.L
XM_018236656 X. laevis.L
XM_018239333 X. laevis.S

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8853041 EL826879 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
XZT12185 CX320438 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621080 CX341634 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630457 CX370427 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7743392 DN036141 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7570158 CX454583 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558761 CX498066 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555605 CX502928 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513900 CX743383 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7698919 CX931215 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693704 CX920964 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6993887 CF238190 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7667613 CX854577 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8853815 EL815470 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7693704 CX920963 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8853041 EL826880 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7667613 CX854576 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7743392 DN036140 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
XZT12185 CX320437 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7555605 CX502927 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7621080 CX341633 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8853815 EL815471 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7698919 CX931214 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7513900 CX743382 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7570158 CX454582 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8540902 EB467769 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
XL177g23 BJ616584 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL195p20 BJ621120 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL209e15 BJ624691 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL418h02ex BP675010 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403k15ex BP682416 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL512l05ex BP704591 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL020c09 BJ033230 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035n18 BJ042490 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3549858 BG578482 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:8735879 EE328798 5' X. laevis.L NICHD_XGC_panc pancreas frog
XL094p23 BJ071631 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071b04 BJ074668 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL512p04ex BP737558 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404k15ex BP721751 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403k15ex BP718749 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL418h02ex BP712525 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL209e15 BJ641203 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL195p20 BJ637835 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL186n18 BJ635449 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL185n18 BJ635205 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL177g23 BJ633136 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8735879 EE311313 3' X. laevis.L NICHD_XGC_panc pancreas frog
XL094p23 BJ091384 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071b04 BJ081247 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549858 BG555242 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL035n18 BJ056444 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020c09 BJ048527 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15