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Summary Expression Phenotypes Gene Literature (1) GO Terms (13) Nucleotides (144) Proteins (63) Interactants (29) Wiki
XB-GENEPAGE-967110

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atg4b - All

Models - Gene (33)
Models - mRNA (38)
mRNAs (11)
ESTs (28)

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g017760 X. tropicalis
NCBI 10.1 XBXL10_1g24177 X. laevis.L
NCBI 10.1 XBXL10_1g26007 X. laevis.S
ENSEMBL 10.0 atg4b X. tropicalis
JGI 9.1 Xelaev18027812m.g X. laevis.L
JGI 9.1 Xelaev18029880m.g X. laevis.S
Xenbase 9.1 gene6450 X. tropicalis
Xenbase 9.2 gene19126 X. laevis.L
Xenbase 9.2 gene43716 X. laevis.S
ENSEMBL 9.1 atg4b X. tropicalis
JGI 8.0 Xetrov14021622m.g X. tropicalis
JGI 7.1 Xetro.I00838 X. tropicalis
JGI 7.2 Xelaev16049025m.g X. laevis.L
JGI 6.0 XeXenL6RMv10038641m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000002981 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240120 X. tropicalis
JGI 4.1 e_gw1.224.114.1 X. tropicalis
JGI 4.1 e_gw1.224.120.1 X. tropicalis
JGI 4.1 e_gw1.224.85.1 X. tropicalis
JGI 4.1 gw1.224.114.1 X. tropicalis
JGI 4.1 gw1.224.120.1 X. tropicalis
JGI 4.1 gw1.224.85.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2240031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240114 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2240015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240057 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2240021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_224000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000057 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000058 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_224000022 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA087641 X. tropicalis
NCBI 10.1 XBmRNA45242 X. laevis.L
NCBI 10.1 XBmRNA48662 X. laevis.S
ENSEMBL 10.0 ENSXETT00000097444 X. tropicalis
ENSEMBL 10.0 ENSXETT00000006516 X. tropicalis
JGI 9.1 Xelaev18027812m X. laevis.L
JGI 9.1 Xelaev18029880m X. laevis.S
Xenbase 9.1 rna20812 X. tropicalis
Xenbase 9.2 rna55861 X. laevis.L
Xenbase 9.2 rna87238 X. laevis.S
ENSEMBL 9.1 ENSXETT00000097444 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089750 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087108 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006516 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100262 X. tropicalis
JGI 8.0 Xetrov14021622m X. tropicalis
JGI 7.1 Xetro.I00838.1 X. tropicalis
JGI 7.2 Xelaev16049025m X. laevis.L
JGI 6.0 XeXenL6RMv10038641m X. laevis.L
JGI 4.1 estExt_Genewise1.C_2240120 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006516 X. tropicalis
JGI 4.1 e_gw1.224.114.1 X. tropicalis
JGI 4.1 e_gw1.224.120.1 X. tropicalis
JGI 4.1 e_gw1.224.85.1 X. tropicalis
JGI 4.1 gw1.224.114.1 X. tropicalis
JGI 4.1 gw1.224.120.1 X. tropicalis
JGI 4.1 gw1.224.85.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2240031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240114 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2240015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240057 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2240021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_224000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000057 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000058 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_224000022 X. tropicalis

mRNAs (11)

Clone Accession Species Library Anatomy Stage
NM_001078996 X. tropicalis
IMAGE:7669497 BC121870 X. tropicalis NIH_XGC_tropBrn4 brain frog
XM_018093940 X. tropicalis
XM_012970551 X. tropicalis
IMAGE:4959884 BC082660 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001094556 X. laevis.L
XM_018265830 X. laevis.S
XM_018262029 X. laevis.L
XM_018262028 X. laevis.L
XM_018262027 X. laevis.L
XM_041564968 X. laevis.S

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8871026 EL713217 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7629569 CX368815 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602055 CX365436 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7714889 CX974325 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7669497 CX875591 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
THdA009g13 CR581324 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA073m10 CR433271 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027o22 CR413455 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas112h16 AL962570 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA067o16 BX721240 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8871026 EL713216 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7669497 CX875590 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7629569 DR900779 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602055 DR892944 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7714889 CX974324 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA009g13 CR581325 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA027o22 CR413456 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA067o16 BX721241 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xlk68c05ex DC056831 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8540932 EB480412 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8545330 EB469367 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGp998K2110929 BX846236 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL209c01 BJ624634 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6634078 BU908586 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4959884 BM192447 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
rxlk68c05ex DC023396 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL209c01 BJ641153 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4959884 BM192790 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32