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Summary Expression Phenotypes Gene Literature (22) GO Terms (23) Nucleotides (158) Proteins (81) Interactants (183) Wiki
XB-GENEPAGE-971135

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ebf2 - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (28)
Models - mRNA (38)
mRNAs (5)
ESTs (20)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_203869 NM_203869.1 transcription factor coe2 2414 bp NP_989200 X. tropicalis
XM_012958768 XM_012958768.3 transcription factor coe2 isoform X1 2469 bp XP_012814222 X. tropicalis
XM_012958769 XM_012958769.3 transcription factor coe2 isoform X2 2302 bp XP_012814223 X. tropicalis
XM_012958770 XM_012958770.3 transcription factor coe2 isoform X3 1992 bp XP_012814224 X. tropicalis

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g017970 X. tropicalis
ENSEMBL 10.0 ebf2 X. tropicalis
Xenbase 9.1 gene23155 X. tropicalis
ENSEMBL 9.1 ebf2 X. tropicalis
JGI 7.1 Xetro.C00385 X. tropicalis
ENSEMBL 4.1 ENSXETG00000010153 X. tropicalis
JGI 4.1 gw1.30.15.1 X. tropicalis
JGI 4.1 gw1.30.225.1 X. tropicalis
JGI 4.1 gw1.30.25.1 X. tropicalis
JGI 4.1 gw1.30.339.1 X. tropicalis
JGI 4.1 gw1.30.47.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_300102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300015 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_300034 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300339 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_300141 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_300142 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_300049 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_30000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_30000145 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_30000146 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_30000051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300225 X. tropicalis
JGI 4.1 e_gw1.30.15.1 X. tropicalis
JGI 4.1 e_gw1.30.225.1 X. tropicalis
JGI 4.1 e_gw1.30.25.1 X. tropicalis
JGI 4.1 e_gw1.30.339.1 X. tropicalis
JGI 4.1 e_gw1.30.47.1 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000097004 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099413 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022402 X. tropicalis
NCBI 10.0 mRNA088761 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099413 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101902 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103021 X. tropicalis
Xenbase 9.1 rna46565 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022402 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072192 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075237 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093084 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097004 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100789 X. tropicalis
JGI 7.1 Xetro.C00385.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_30000145 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_30000146 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_30000051 X. tropicalis
JGI 4.1 gw1.30.15.1 X. tropicalis
JGI 4.1 gw1.30.225.1 X. tropicalis
JGI 4.1 gw1.30.25.1 X. tropicalis
JGI 4.1 gw1.30.339.1 X. tropicalis
JGI 4.1 gw1.30.47.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_300141 X. tropicalis
JGI 4.1 e_gw1.30.225.1 X. tropicalis
JGI 4.1 e_gw1.30.25.1 X. tropicalis
JGI 4.1 e_gw1.30.339.1 X. tropicalis
JGI 4.1 e_gw1.30.47.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022402 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_300034 X. tropicalis
JGI 4.1 e_gw1.30.15.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_300142 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_300049 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_300102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300225 X. tropicalis
JGI 4.1 estExt_Genewise1.C_300339 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_30000036 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:5383656 BC063360 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_203869 X. tropicalis
XM_012958768 X. tropicalis
XM_012958769 X. tropicalis
XM_012958770 X. tropicalis

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8887712 EL845461 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6991609 CF240476 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383656 BQ395797 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7094051 CK662610 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
THdA004n14 CR564573 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XZT1231 CX360313 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620424 CX341098 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT10836 CX310719 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7747872 DN044440 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7745693 DN040070 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
st26f21 DC170613 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7620424 CX341097 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5383656 BQ395796 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
rst26f21 DC140451 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA011k22 CR433367 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA004n14 CR564574 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XZT10836 CX310718 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6991609 CF240477 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XZT1231 CX360312 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7747872 DN044439 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog