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Summary Expression Phenotypes Gene Literature (12) GO Terms (4) Nucleotides (124) Proteins (56) Interactants (95) Wiki
XB-GENEPAGE-976071

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hira - All

Models - Gene (29)
Models - mRNA (36)
mRNAs (11)
ESTs (27)

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g004424 X. tropicalis
NCBI 10.1 XBXL10_1g5291 X. laevis.S
NCBI 10.1 XBXL10_1g2721 X. laevis.L
ENSEMBL 10.0 hira X. tropicalis
JGI 9.1 Xelaev18010537m.g X. laevis.S
JGI 9.1 Xelaev18000384m.g X. laevis.L
Xenbase 9.1 gene33493 X. tropicalis
Xenbase 9.2 gene18677 X. laevis.S
Xenbase 9.2 gene49751 X. laevis.L
ENSEMBL 9.1 hira X. tropicalis
JGI 8.0 Xetrov14001513m.g X. tropicalis
JGI 7.1 Xetro.A00807 X. tropicalis
JGI 7.2 Xelaev16080292m.g X. laevis.S
JGI 6.0 XeXenL6RMv10022010m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018598 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120022 X. tropicalis
JGI 4.1 e_gw1.12.2.1 X. tropicalis
JGI 4.1 e_gw1.12.209.1 X. tropicalis
JGI 4.1 e_gw1.12.210.1 X. tropicalis
JGI 4.1 gw1.12.2.1 X. tropicalis
JGI 4.1 gw1.12.209.1 X. tropicalis
JGI 4.1 gw1.12.210.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120206 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120207 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120075 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000075 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000022 X. tropicalis

Models - mRNA (36)

Source Version Model Species
NCBI 10.0 mRNA022067 X. tropicalis
NCBI 10.1 XBmRNA4783 X. laevis.L
NCBI 10.1 XBmRNA9839 X. laevis.S
ENSEMBL 10.0 ENSXETT00000067965 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080141 X. tropicalis
JGI 9.1 Xelaev18010537m X. laevis.S
JGI 9.1 Xelaev18000384m X. laevis.L
Xenbase 9.1 rna63111 X. tropicalis
Xenbase 9.2 rna95864 X. laevis.L
Xenbase 9.2 rna54527 X. laevis.S
ENSEMBL 9.1 ENSXETT00000067965 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040254 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084580 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075044 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080141 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079497 X. tropicalis
JGI 8.0 Xetrov14001513m X. tropicalis
JGI 7.1 Xetro.A00807.1 X. tropicalis
JGI 7.2 Xelaev16080292m X. laevis.S
JGI 6.0 XeXenL6RMv10022010m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_120022 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040254 X. tropicalis
JGI 4.1 e_gw1.12.2.1 X. tropicalis
JGI 4.1 e_gw1.12.209.1 X. tropicalis
JGI 4.1 e_gw1.12.210.1 X. tropicalis
JGI 4.1 gw1.12.2.1 X. tropicalis
JGI 4.1 gw1.12.209.1 X. tropicalis
JGI 4.1 gw1.12.210.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120206 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120207 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120075 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000075 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000022 X. tropicalis

mRNAs (11)

Clone Accession Species Library Anatomy Stage
XM_002931904 X. tropicalis
AJ404369 AJ404369 X. laevis.S
X7 AJ278386 X. laevis.S
EX1-XHIRA AJ278388 X. laevis.S
X26 AJ278387 X. laevis.S
IMAGE:7299597 BC133800 X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XM_018242445 X. laevis.L
XM_018244119 X. laevis.S
XM_018244118 X. laevis.S
XM_041567044 X. laevis.L
XM_041567042 X. laevis.L

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8965678 EL654832 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7621004 DR898469 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA017g08 CR568683 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas106e23 AL958845 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7621004 DR898468 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xl308o15 DC125690 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl252k04 DC109550 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8319418 DY572506 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL456l23ex BP688221 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998E019346 BX847661 5' X. laevis.S Wellcome CRC pRN3 St13 17 whole organism NF stage 13 to NF stage 17
XL186p16 BJ618869 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL091h18 BJ070721 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085g20 BJ066198 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL011g10 BJ029124 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015o10 BJ032188 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6865284 CA988222 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4959832 BM192436 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3472994 BI444677 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3743314 BE679821 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0140G05 AW644489 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL186p16 BJ635482 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL085g20 BJ083520 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL015o10 BJ047224 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4959832 BM192768 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3472994 BI449377 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4084584 BI446856 3' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3745426 BE678997 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)