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Summary Expression Phenotypes Gene Literature (10) GO Terms (16) Nucleotides (76) Proteins (44) Interactants (616) Wiki
XB-GENEPAGE-984023

Show:     All X. tropicalis X. laevis

Nucleotide sequences for mmp28 - All

RefSeq mRNAs(7)
Models - Gene (23)
Models - mRNA (23)
mRNAs (10)
ESTs (7)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_002933831 XM_002933831.5 matrix metalloproteinase-28 isoform X1 3548 bp XP_002933877 X. tropicalis
XM_012957449 XM_012957449.3 matrix metalloproteinase-28 isoform X2 3030 bp XP_012812903 X. tropicalis
NM_001090135 NM_001090135.1 matrix metalloproteinase-28 b precursor 1916 bp NP_001083604 X. laevis.S
XM_041583034 XM_041583034.1 XP_041438968.1 matrix metalloproteinase-28 b isoform X1 1914 bp XP_041438968 X. laevis.S
XM_041583035 XM_041583035.1 XP_041438969.1 matrix metalloproteinase-28 b isoform X1 1982 bp XP_041438969 X. laevis.S
XM_041583036 XM_041583036.1 XP_041438970.1 matrix metalloproteinase-28 b isoform X1 2041 bp XP_041438970 X. laevis.S
NM_001172229 NM_001172229.2 matrix metalloproteinase-28 a precursor 1977 bp NP_001165700 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g7438 X. laevis.L
NCBI 10.1 XBXL10_1g10230 X. laevis.S
NCBI 10.0 XBXT10g003775 X. tropicalis
ENSEMBL 10.0 mmp28 X. tropicalis
Xenbase 9.2 gene41725 X. laevis.L
Xenbase 9.2 gene9933 X. laevis.S
JGI 9.1 Xelaev18015307m.g X. laevis.S
JGI 9.1 Xelaev18012682m.g X. laevis.L
Xenbase 9.1 gene20323 X. tropicalis
ENSEMBL 9.1 mmp28 X. tropicalis
JGI 7.2 Xelaev16056716m.g X. laevis.S
JGI 7.2 Xelaev16035922m.g X. laevis.L
JGI 7.1 Xetro.B00341 X. tropicalis
JGI 6.0 XeXenL6RMv10021039m.g X. laevis.L
JGI 6.0 XeXenL6RMv10053279m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013462 X. tropicalis
JGI 4.1 e_gw1.72.178.1 X. tropicalis
JGI 4.1 gw1.72.178.1 X. tropicalis
JGI 4.1 gw1.72.96.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000031 X. tropicalis
JGI 4.1 e_gw1.72.96.1 X. tropicalis
JGI 4.1 e_gw1.72.145.1 X. tropicalis
JGI 4.1 gw1.72.145.1 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA19133 X. laevis.S
NCBI 10.1 XBmRNA14024 X. laevis.L
ENSEMBL 10.0 ENSXETT00000029498 X. tropicalis
NCBI 10.0 mRNA019023 X. tropicalis
Xenbase 9.2 rna28874 X. laevis.S
Xenbase 9.2 rna84275 X. laevis.L
JGI 9.1 Xelaev18012682m X. laevis.L
Xenbase 9.1 rna42073 X. tropicalis
JGI 9.1 Xelaev18015307m X. laevis.S
ENSEMBL 9.1 ENSXETT00000029498 X. tropicalis
JGI 7.2 Xelaev16035922m X. laevis.L
JGI 7.2 Xelaev16056716m X. laevis.S
JGI 7.1 Xetro.B00341.1 X. tropicalis
JGI 6.0 XeXenL6RMv10021039m X. laevis.L
JGI 6.0 XeXenL6RMv10053279m X. laevis.S
JGI 4.1 gw1.72.178.1 X. tropicalis
JGI 4.1 gw1.72.145.1 X. tropicalis
JGI 4.1 e_gw1.72.145.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_72000031 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029498 X. tropicalis
JGI 4.1 e_gw1.72.96.1 X. tropicalis
JGI 4.1 e_gw1.72.178.1 X. tropicalis
JGI 4.1 gw1.72.96.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
XM_002933831 X. tropicalis
XM_012957449 X. tropicalis
IMAGE:4030599 BC061659 X. laevis.S
NM_001090135 X. laevis.S
XM_041583034 X. laevis.S
XM_041583035 X. laevis.S
XM_041583036 X. laevis.S
EF187277 X. laevis.L
EF187278 X. laevis.L
NM_001172229 X. laevis.L

ESTs (7)

Clone Accession 5'/3' Species Library Anatomy Stage
XL074m06 BJ062024 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6872115 CB197241 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:8533437 EB471005 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL077h03 BJ063812 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL077h03 BJ081941 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6872115 CB562940 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL074m06 BJ080182 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25