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XB-MORPHOLINO-17249331
Morpholino Name:
ctnnb1 MO2
Synonyms: bcat, beta-catenin morpholino
Target mRNA: ctnnb1
Morpholino Type: uncategorized morpholino
Sequence: 5' TTTCAACAGTTTCCAAAGAACCAGG 3'
Source: Gene Tools LLC
Synonyms: bcat, beta-catenin morpholino
Target mRNA: ctnnb1
Morpholino Type: uncategorized morpholino
Sequence: 5' TTTCAACAGTTTCCAAAGAACCAGG 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||||
| Identities | 25/25 | 24/25 | 25/25 | ||||
| genomic MO |
5' CCTGGTTCTTTGGAAACTGTTGAAA 3' ||||||||||||||||||||||||| 3' GGACCAAGAAACCTTTGACAACTTT 5' | 5' CCTGGTTCTTTGGAAACGGTTGAAA 3' ||||||||||||||||| ||||||| 3' GGACCAAGAAACCTTTGACAACTTT 5' | 5' CCTGGTTCTTTGGAAACTGTTGAAA 3' ||||||||||||||||||||||||| 3' GGACCAAGAAACCTTTGACAACTTT 5' | ||||
Genomic Alignments  |
Position | Identity | Strand | Target | Target mRNA | ||
| laevis 10.1 | Chr6S:46318428..46318452 | 25/25 | Antisense | target | ctnnb1.S | ||
| Chr6L:56687417..56687441 | 24/25 | Antisense | target | ctnnb1.L | |||
| Chr3L:113891792..113891816 | 21/25 | Sense | off-target | unc45a.L | |||
| Chr2L:73517505..73517529 | 22/25 | Sense | off-target | LOC108708155 | |||
| Chr1L:456271..456295 | 21/25 | Antisense | off-target | LOC108704858 | |||
| Chr3L:58487759..58487783 | 21/25 | Antisense | off-target | LOC108711038 | |||
| Chr8L:65727772..65727796 | 21/25 | Antisense | off-target | LOC108698939 | |||
| Chr2S:11093252..11093276 | 21/25 | unknown | |||||
| Chr2S:159424587..159424611 | 21/25 | unknown | |||||
| Chr5S:78155467..78155491 | 21/25 | unknown | |||||
| Chr5S:9986662..9986686 | 21/25 | unknown | |||||
| Chr6L:19520279..19520303 | 21/25 | unknown | |||||
| Chr7L:94336176..94336200 | 21/25 | unknown | tropicalis 10.0 | Chr6:53369028..53369052 | 25/25 | 1 Antisense | target | ctnnb1 |
| Chr4:119773021..119773045 | 21/25 | 2 Sense | off-target | prg4 | |||
| Chr6:82995286..82995310 | 21/25 | 3 Sense | off-target | cdh9 | |||
| Chr3:117338308..117338332 | 21/25 | 4 | unknown | ||||
| Publications | |||||||
| First: |
Techniques and probes for the study of Xenopus tropicalis development., Dev Dyn 2002  |
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| Most recent: |
Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Elife 2020  |
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| View All Papers | |||||||
