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XB-gRNA-23659397
gRNA Name:
lep gRNA1
Synonyms: trop lep T12
Genomic Target: lep
PAM Sequence: AGG
Sequence: 5' ATGCCAAGGAAGAGCTATAAAGG 3'
Synonyms: trop lep T12
Genomic Target: lep
PAM Sequence: AGG
Sequence: 5' ATGCCAAGGAAGAGCTATAAAGG 3'

Genomic Target | tropicalis | laevis.L | laevis.S | ||||
Identities | 23/23 | 20/23 | |||||
genomic gRNA |
5' CCTTTATAGCTCTTCCTTGGCAT 3' ||||||||||||||||||||||| 3' GGAAATATCGAGAAGGAACCGTA 5' | 5' CCTTTATAGCTCGCCCTTGGCTT 3' |||||||||||| ||||||| | 3' GGAAATATCGAGAAGGAACCGTA 5' | |||||
Genomic Alignments ![]() |
Position | Identity | Strand | Target | Genomic Target | ||
laevis 9.2 | chr3S:62853534..62853556 | 20/23 | Sense | target | lep.S | ||
chr8L:23058871..23058893 | 19/23 | Antisense | off-target | atrx.L | |||
chr6L:90551698..90551720 | 19/23 | Sense | off-target | XB5863395.L [provisional] | |||
chr4S:34451192..34451214 | 20/23 | Sense | off-target | LOC108714966 [provisional:wwox] | |||
chr6S:13084819..13084841 | 19/23 | unknown | |||||
chr6S:42671366..42671388 | 19/23 | unknown | |||||
chr7S:30565814..30565836 | 19/23 | unknown | |||||
chr7S:40971195..40971217 | 19/23 | unknown | tropicalis 10.0 | Chr3:87925111..87925133 | 23/23 | Sense | target | lep |
Chr1:27865046..27865068 | 19/23 | Sense | off-target | cc2d2a | |||
Chr6:52492812..52492834 | 19/23 | Antisense | off-target | dnajc13 | |||
Chr2:142846009..142846031 | 20/23 | unknown | |||||
Chr1:27280793..27280815 | 19/23 | unknown | |||||
Chr7:43002551..43002573 | 19/23 | unknown | |||||
Chr9:23119208..23119230 | 19/23 | unknown | |||||
Publications | |||||||
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