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XB-gRNA-23659750
gRNA Name:
ift80 gRNA1
Synonyms: ift80 gRNA E8
Genomic Target: ift80
PAM Sequence: CCA
Sequence: 5' GTGTTTGGCTTTTCCAAGGC 3'
Synonyms: ift80 gRNA E8
Genomic Target: ift80
PAM Sequence: CCA
Sequence: 5' GTGTTTGGCTTTTCCAAGGC 3'

Genomic Target | tropicalis | laevis.L | laevis.S | ||||
Identities | 20/20 | 19/20 | |||||
genomic gRNA |
5' GCCTTGGAAAAGCCAAACAC 3' |||||||||||||||||||| 3' CGGAACCTTTTCGGTTTGTG 5' | 5' TCCTTGGAAAAGCCAAACAC 3' ||||||||||||||||||| 3' CGGAACCTTTTCGGTTTGTG 5' | |||||
Genomic Alignments ![]() |
Position | Identity | Strand | Target | Genomic Target | ||
laevis 9.2 | chr5L:111757453..111757472 | 19/20 | Antisense | target | ift80.L | ||
chr1S:175911596..175911615 | 18/20 | Sense | off-target | syt4.S | |||
chr9_10L:61757126..61757145 | 18/20 | Sense | off-target | dpp4.L | |||
chr1L:104499424..104499443 | 17/20 | Antisense | off-target | comp.L | |||
chr3S:52981704..52981723 | 18/20 | Sense | off-target | cgnl1.S | |||
chr3S:1174066..1174085 | 17/20 | Sense | off-target | krasl.S | |||
chr7L:97040313..97040332 | 16/20 | Antisense | off-target | ttc34.L | |||
chr8S:95153156..95153175 | 16/20 | Antisense | off-target | igsf9.S | |||
chr3L:7144334..7144353 | 17/20 | Antisense | off-target | hmgxb3.L | |||
chr3S:99243579..99243598 | 16/20 | Sense | off-target | pdlim7.S | |||
chr9_10L:13338682..13338701 | 17/20 | Sense | off-target | LOC108700910 | |||
chr4L:14990741..14990760 | 16/20 | Sense | off-target | LOC108713817 | |||
chr9_10S:72430853..72430872 | 16/20 | Antisense | off-target | LOC108702412 | |||
chr4S:4663696..4663715 | 16/20 | Antisense | off-target | Xetrov90010614m.S | |||
chr1S:125988088..125988107 | 17/20 | Sense | off-target | LOC108707118 [provisional:lrrc75b] | |||
Scaffold34340:376..395 | 19/20 | unknown | |||||
chr8L:35395165..35395184 | 18/20 | unknown | |||||
chr1L:213572628..213572647 | 17/20 | unknown | |||||
chr3S:101232676..101232695 | 16/20 | unknown | |||||
chr8L:113149312..113149331 | 16/20 | unknown | tropicalis 10.0 | Chr5:114825848..114825867 | 20/20 | 1 Antisense | target | ift80 |
Chr9:72079505..72079524 | 18/20 | 2 Sense | off-target | dpp4 | |||
Chr6:57310270..57310289 | 18/20 | 3 Sense | off-target | hecw1 | |||
Chr7:59823033..59823052 | 18/20 | 4 Sense | off-target | cabp2 | |||
Chr2:106280531..106280550 | 17/20 | 5 Sense | off-target | frmpd4 | |||
Chr3:21450538..21450557 | 17/20 | 6 Antisense | off-target | hmgxb3 | |||
Chr8:54590070..54590089 | 17/20 | 7 Sense | off-target | LOC116406910 | |||
Chr1:208989395..208989414 | 17/20 | 8 | unknown | ||||
Chr1:38444961..38444980 | 17/20 | 9 | unknown | ||||
Chr8:6916171..6916190 | 17/20 | 10 | unknown | ||||
Publications | |||||||
First: |
Ttc30a affects tubulin modifications in a model for ciliary chondrodysplasia with polycystic kidney disease., Proc Natl Acad Sci U S A 2021 ![]() |
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Most recent: | |||||||
View All Papers |