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XB-PHENO-25100

WT + SCNT endoderm cell + Mmu.kdm5bdel, Hörmanseder E et al. (2017)

Experiment + Assay: WT + SCNT endoderm cell + Mmu.kdm5bdel + ectoderm NF11 (RNA-Seq) grp5
Background: Xla.pigmentedNasco
Manipulations:
Manipulation Type Reagent Target Gene Stage Treatment Area
SCNT  
mature egg stage egg
mRNA injection Tg(Mmu.kdm5bdel) kdm5b (Xla)
NF stage 18 endodermal cell
Conditions:
Assay Type Assay Stages Antibody
RNA-Seq NF stage 11  
Expression Phenotypes (400):
increased amount 1a11.L expression in the ectoderm
decreased amount a2m.S expression in the ectoderm
increased amount a2ml1.L expression in the ectoderm
decreased amount ablim1.S expression in the ectoderm
increased amount adamts1.S expression in the ectoderm
increased amount adora2a.L expression in the ectoderm
increased amount adora2a.S expression in the ectoderm
increased amount afap1l1.L expression in the ectoderm
decreased amount ag1.S expression in the ectoderm
increased amount alpl.L expression in the ectoderm
decreased amount ano10l.L expression in the ectoderm
decreased amount apbb1ip.S expression in the ectoderm
increased amount aplnr.L expression in the ectoderm
increased amount aplnr.S expression in the ectoderm
increased amount apoc1.L expression in the ectoderm
decreased amount apold1.L expression in the ectoderm
decreased amount arfip2.S expression in the ectoderm
increased amount arhgap30.S expression in the ectoderm
increased amount arid1b.S expression in the ectoderm
decreased amount armh4.S expression in the ectoderm
decreased amount arntl.L expression in the ectoderm
increased amount asgr2.L expression in the ectoderm
increased amount atf6b.L expression in the ectoderm
decreased amount atp6v0d2.L expression in the ectoderm
increased amount atrn.S expression in the ectoderm
increased amount b3galt1.S expression in the ectoderm
decreased amount b3galt2l.1.L expression in the ectoderm
increased amount bcl11a.S expression in the ectoderm
decreased amount bco2l.L expression in the ectoderm
decreased amount bcr.L expression in the ectoderm
increased amount bmf.L expression in the ectoderm
increased amount bmp15.S expression in the ectoderm
decreased amount bmp3.S expression in the ectoderm
increased amount bpnt1.L expression in the ectoderm
increased amount c4orf48.S expression in the ectoderm
increased amount c8orf48.L expression in the ectoderm
increased amount c9.L expression in the ectoderm
decreased amount cacna1d.S expression in the ectoderm
increased amount camk2d.L expression in the ectoderm
increased amount camk2n2.S expression in the ectoderm
increased amount cap2.S expression in the ectoderm
increased amount capn10l.L expression in the ectoderm
increased amount capn13.S expression in the ectoderm
decreased amount capn8.1.S expression in the ectoderm
decreased amount card9.L expression in the ectoderm
increased amount caskin2.L expression in the ectoderm
increased amount casq1.L expression in the ectoderm
increased amount cat.3.S expression in the ectoderm
decreased amount cbr1.2.L expression in the ectoderm
increased amount cbr1.3.L expression in the ectoderm
decreased amount cdc42ep4.S expression in the ectoderm
increased amount cdh18.S expression in the ectoderm
increased amount cdkn1a.L expression in the ectoderm
increased amount cdkn2b.L expression in the ectoderm
increased amount cdx1.L expression in the ectoderm
increased amount cdx1.S expression in the ectoderm
increased amount cdx4.S expression in the ectoderm
decreased amount cebpb.L expression in the ectoderm
decreased amount cebpb.S expression in the ectoderm
increased amount cep19.L expression in the ectoderm
increased amount cfb.S expression in the ectoderm
decreased amount chga.S expression in the ectoderm
decreased amount chkb.S expression in the ectoderm
increased amount chn2.L expression in the ectoderm
increased amount chn2.S expression in the ectoderm
increased amount chrng.L expression in the ectoderm
increased amount chst2.S expression in the ectoderm
increased amount chst9l.2.L expression in the ectoderm
increased amount ckap2.S expression in the ectoderm
increased amount clcn2.L expression in the ectoderm
increased amount cntrl.L expression in the ectoderm
increased amount col5a2.S expression in the ectoderm
increased amount comt.S expression in the ectoderm
increased amount coro1a.S expression in the ectoderm
decreased amount coro1a.S expression in the ectoderm
increased amount cpa6.S expression in the ectoderm
decreased amount cplane2.L expression in the ectoderm
decreased amount cplx3.L expression in the ectoderm
increased amount cpm.L expression in the ectoderm
increased amount crabp2.L expression in the ectoderm
increased amount crabp2.S expression in the ectoderm
increased amount crim1.L expression in the ectoderm
decreased amount crx.L expression in the ectoderm
decreased amount crx.S expression in the ectoderm
increased amount cry4.L expression in the ectoderm
decreased amount crygdl.10.S expression in the ectoderm
decreased amount crygdl.11.S expression in the ectoderm
decreased amount crygdl.14.S expression in the ectoderm
increased amount crygdl.7.S expression in the ectoderm
increased amount ctps1.L expression in the ectoderm
decreased amount ctse.L expression in the ectoderm
increased amount cul5.S expression in the ectoderm
increased amount cybc1.S expression in the ectoderm
increased amount cyp27c1.L expression in the ectoderm
increased amount cyp27c1.S expression in the ectoderm
decreased amount dact4.L expression in the ectoderm
increased amount dapl1.S expression in the ectoderm
increased amount dcaf5.L expression in the ectoderm
increased amount dcdc2.S expression in the ectoderm
increased amount ddr1.L expression in the ectoderm
decreased amount dennd3.L expression in the ectoderm
increased amount dhx35.L expression in the ectoderm
decreased amount dipk1c.S expression in the ectoderm
increased amount diras3.L expression in the ectoderm
increased amount dlk2.L expression in the ectoderm
increased amount dnah1.L expression in the ectoderm
increased amount dock2.L expression in the ectoderm
decreased amount dok6.S expression in the ectoderm
decreased amount dpf1.S expression in the ectoderm
increased amount dpysl5.S expression in the ectoderm
increased amount dscaml1.L expression in the ectoderm
increased amount ecm1.L expression in the ectoderm
increased amount eda2r.L expression in the ectoderm
increased amount eef1a2.S expression in the ectoderm
decreased amount egfl6.L expression in the ectoderm
decreased amount egr1.L expression in the ectoderm
decreased amount egr1.S expression in the ectoderm
decreased amount egr2.L expression in the ectoderm
decreased amount egr4.L expression in the ectoderm
decreased amount elapor1.S expression in the ectoderm
increased amount ell3.L expression in the ectoderm
increased amount ephb1.L expression in the ectoderm
increased amount eps8l3.S expression in the ectoderm
decreased amount ereg.S expression in the ectoderm
increased amount esco2.L expression in the ectoderm
decreased amount esyt3.S expression in the ectoderm
decreased amount eya1.L expression in the ectoderm
increased amount fam131a.S expression in the ectoderm
increased amount fam228b.S expression in the ectoderm
increased amount fas.L expression in the ectoderm
increased amount fbxo6.S expression in the ectoderm
increased amount fgd6.S expression in the ectoderm
increased amount fgf3.S expression in the ectoderm
increased amount fgf8.S expression in the ectoderm
decreased amount fhl3.L expression in the ectoderm
increased amount fhl5.L expression in the ectoderm
decreased amount fkbp10.S expression in the ectoderm
increased amount fkbp9.L expression in the ectoderm
decreased amount fos.L expression in the ectoderm
decreased amount fos.S expression in the ectoderm
increased amount foxd4l1.1.S expression in the ectoderm
decreased amount foxi1.S expression in the ectoderm
decreased amount foxi4.1.L expression in the ectoderm
decreased amount foxi4.1.S expression in the ectoderm
increased amount foxo3.S expression in the ectoderm
decreased amount frk.L expression in the ectoderm
decreased amount fzd4.S expression in the ectoderm
decreased amount gadd45b.L expression in the ectoderm
decreased amount galnt16.L expression in the ectoderm
decreased amount gap43.L expression in the ectoderm
decreased amount gata3.L expression in the ectoderm
decreased amount gata3.S expression in the ectoderm
decreased amount gata4.S expression in the ectoderm
increased amount gckr.L expression in the ectoderm
increased amount gdap1.L expression in the ectoderm
increased amount gdf3.S expression in the ectoderm
increased amount gm2a.L expression in the ectoderm
increased amount gng7.S expression in the ectoderm
increased amount gpr27.S expression in the ectoderm
increased amount gpr45.S expression in the ectoderm
increased amount gpx8.L expression in the ectoderm
increased amount gucy1a2.L expression in the ectoderm
decreased amount h2bc11.S expression in the ectoderm
decreased amount hamp.L expression in the ectoderm
increased amount hars1.L expression in the ectoderm
increased amount hba1.S expression in the ectoderm
increased amount hbg1.L expression in the ectoderm
increased amount hepacam.L expression in the ectoderm
decreased amount hes2.L expression in the ectoderm
increased amount hes3.S expression in the ectoderm
increased amount hip1.L expression in the ectoderm
decreased amount hkdc1.S expression in the ectoderm
decreased amount hoxa11.L expression in the ectoderm
increased amount hoxd1.S expression in the ectoderm
decreased amount hs3st1.L expression in the ectoderm
decreased amount hs3st3a1.L expression in the ectoderm
decreased amount hs6st1.S expression in the ectoderm
increased amount hsd3b1.L expression in the ectoderm
decreased amount hsp70.L expression in the ectoderm
decreased amount htr1d.S expression in the ectoderm
decreased amount ido1.L expression in the ectoderm
decreased amount il15ra.S expression in the ectoderm
increased amount il17rd.L expression in the ectoderm
increased amount il17rd.S expression in the ectoderm
increased amount il1rap.S expression in the ectoderm
decreased amount inka1.S expression in the ectoderm
decreased amount irx4.S expression in the ectoderm
decreased amount isl1.L expression in the ectoderm
increased amount itgb3.L expression in the ectoderm
decreased amount itpka.S expression in the ectoderm
decreased amount jun.L expression in the ectoderm
decreased amount junb.L expression in the ectoderm
decreased amount junb.S expression in the ectoderm
decreased amount kcna3.S expression in the ectoderm
decreased amount kifc3.S expression in the ectoderm
decreased amount kitlg.S expression in the ectoderm
decreased amount krt59.L expression in the ectoderm
increased amount ldb3.S expression in the ectoderm
increased amount ldlrad3.L expression in the ectoderm
increased amount lgals4.2.L expression in the ectoderm
increased amount lhcgr.L expression in the ectoderm
increased amount lif.S expression in the ectoderm
increased amount lim2.L expression in the ectoderm
decreased amount lmo4.1.S expression in the ectoderm
decreased amount lrrc4c.S expression in the ectoderm
increased amount ltbp1.S expression in the ectoderm
increased amount lypd2.L expression in the ectoderm
decreased amount lypd6.L expression in the ectoderm
decreased amount lypd6.S expression in the ectoderm
increased amount lzts3.L expression in the ectoderm
increased amount maco1.S expression in the ectoderm
increased amount mafb.S expression in the ectoderm
decreased amount map3k8.L expression in the ectoderm
increased amount marchf8.L expression in the ectoderm
increased amount marchf8.S expression in the ectoderm
decreased amount mcm5.S expression in the ectoderm
increased amount mdk.S expression in the ectoderm
decreased amount mfsd2a.L expression in the ectoderm
decreased amount mgc146443.L expression in the ectoderm
increased amount mmp1.L expression in the ectoderm
increased amount mmp14.L expression in the ectoderm
increased amount mmp14.S expression in the ectoderm
decreased amount mmp3.L expression in the ectoderm
decreased amount mn1.L expression in the ectoderm
decreased amount mn1.S expression in the ectoderm
increased amount mrc2.S expression in the ectoderm
increased amount mrpl40.L expression in the ectoderm
increased amount msh4.L expression in the ectoderm
increased amount myl3.L expression in the ectoderm
decreased amount myo1e.1.S expression in the ectoderm
increased amount myom2.S expression in the ectoderm
increased amount nceh1.S expression in the ectoderm
decreased amount nedd9.L expression in the ectoderm
decreased amount nedd9.S expression in the ectoderm
increased amount neurog1.L expression in the ectoderm
increased amount nppb.S expression in the ectoderm
decreased amount nr4a1.L expression in the ectoderm
decreased amount nr4a1.S expression in the ectoderm
increased amount nt5m.L expression in the ectoderm
increased amount ntn4.S expression in the ectoderm
increased amount nupr1.L expression in the ectoderm
increased amount nxpe3l.L expression in the ectoderm
decreased amount olfm4.L expression in the ectoderm
decreased amount olig3.S expression in the ectoderm
increased amount olig4.L expression in the ectoderm
decreased amount otx2.S expression in the ectoderm
increased amount p2ry1.L expression in the ectoderm
decreased amount parvg.S expression in the ectoderm
increased amount pcdh19.S expression in the ectoderm
decreased amount pcdh7.L expression in the ectoderm
decreased amount pcdh7.S expression in the ectoderm
increased amount pde7b.L expression in the ectoderm
decreased amount pdgfa.S expression in the ectoderm
increased amount pfn4.S expression in the ectoderm
decreased amount pgr.L expression in the ectoderm
decreased amount phyhdla.2.L expression in the ectoderm
decreased amount phyhdlc.1.L expression in the ectoderm
decreased amount phyhdlc.2.L expression in the ectoderm
increased amount pidd1.L expression in the ectoderm
increased amount pik3r5.S expression in the ectoderm
increased amount pisd-like.2.L expression in the ectoderm
decreased amount pkdcc.1.S expression in the ectoderm
decreased amount pkdcc.2.S expression in the ectoderm
decreased amount plekhg4.S expression in the ectoderm
increased amount plekhg5.S expression in the ectoderm
increased amount plekho1.L expression in the ectoderm
increased amount plk2.S expression in the ectoderm
decreased amount pou4f4.L expression in the ectoderm
increased amount pou5f3.3.L expression in the ectoderm
decreased amount ppl.L expression in the ectoderm
increased amount ppp1r12b.L expression in the ectoderm
increased amount ppp4r4.S expression in the ectoderm
increased amount prag1.S expression in the ectoderm
decreased amount prdm14.L expression in the ectoderm
decreased amount prdm14.S expression in the ectoderm
increased amount prickle1.L expression in the ectoderm
increased amount prickle1.S expression in the ectoderm
decreased amount prph.L expression in the ectoderm
increased amount psat1.S expression in the ectoderm
decreased amount psmg4.S expression in the ectoderm
increased amount ptgs1.S expression in the ectoderm
increased amount ptpn14.S expression in the ectoderm
increased amount ptprt.L expression in the ectoderm
increased amount pxdn.S expression in the ectoderm
decreased amount rab36.L expression in the ectoderm
increased amount rab40b.L expression in the ectoderm
increased amount rasef.S expression in the ectoderm
increased amount rasgef1a.L expression in the ectoderm
increased amount rasl12.S expression in the ectoderm
decreased amount rassf10.L expression in the ectoderm
decreased amount rassf6.S expression in the ectoderm
increased amount rbl2.L expression in the ectoderm
decreased amount rdd4.L expression in the ectoderm
increased amount retn.1.S expression in the ectoderm
decreased amount rgcc.S expression in the ectoderm
increased amount rgl3.S expression in the ectoderm
increased amount rgs10.S expression in the ectoderm
increased amount rgs6.L expression in the ectoderm
increased amount rgs9bpl.S expression in the ectoderm
increased amount rnf130.L expression in the ectoderm
increased amount rnf169.L expression in the ectoderm
increased amount rnf24.L expression in the ectoderm
increased amount robo4.S expression in the ectoderm
increased amount rogdi.S expression in the ectoderm
increased amount runx1.L expression in the ectoderm
increased amount s100a1.L expression in the ectoderm
decreased amount s1pr5.L expression in the ectoderm
decreased amount s1pr5.S expression in the ectoderm
increased amount scamp5.2.S expression in the ectoderm
decreased amount septin5.L expression in the ectoderm
increased amount sesn1.L expression in the ectoderm
increased amount sesn1.S expression in the ectoderm
increased amount sf3a1.S expression in the ectoderm
increased amount sfrpx.L expression in the ectoderm
increased amount sh3gl3.L expression in the ectoderm
decreased amount sik1.S expression in the ectoderm
decreased amount six1.L expression in the ectoderm
increased amount slc16a12.L expression in the ectoderm
increased amount slc18a2.L expression in the ectoderm
decreased amount slc23a1.L expression in the ectoderm
increased amount slc25a39.L expression in the ectoderm
increased amount slc26a9.S expression in the ectoderm
increased amount slc2a15a.L expression in the ectoderm
decreased amount slc35a3.1.L expression in the ectoderm
decreased amount slc7a5.L expression in the ectoderm
decreased amount slc7a5.S expression in the ectoderm
decreased amount slfn13.L expression in the ectoderm
increased amount smpd3.S expression in the ectoderm
decreased amount smpd5l.L expression in the ectoderm
decreased amount sncb.L expression in the ectoderm
increased amount socs4.S expression in the ectoderm
decreased amount sox9.L expression in the ectoderm
decreased amount sox9.S expression in the ectoderm
increased amount sp5l.S expression in the ectoderm
increased amount spag6.L expression in the ectoderm
increased amount sparc.S expression in the ectoderm
increased amount spred1.L expression in the ectoderm
decreased amount st3gal4.L expression in the ectoderm
increased amount sting1.S expression in the ectoderm
increased amount stk32b.L expression in the ectoderm
increased amount synj2.L expression in the ectoderm
increased amount tanc1.L expression in the ectoderm
increased amount tanc1.S expression in the ectoderm
decreased amount tbc1d24.2.L expression in the ectoderm
decreased amount tbx2.L expression in the ectoderm
decreased amount tbx2.S expression in the ectoderm
increased amount tbxt.S expression in the ectoderm
decreased amount tcaf1.L expression in the ectoderm
increased amount tcn2.S expression in the ectoderm
increased amount tent5a.S expression in the ectoderm
increased amount tesk1.S expression in the ectoderm
increased amount tf.L expression in the ectoderm
decreased amount tlx3.L expression in the ectoderm
increased amount tmem116.L expression in the ectoderm
decreased amount tmem229b.L expression in the ectoderm
increased amount tmem269.L expression in the ectoderm
increased amount tnfrsf6b.L expression in the ectoderm
decreased amount tox.L expression in the ectoderm
increased amount tp73.L expression in the ectoderm
increased amount tpbg.L expression in the ectoderm
increased amount traf4.L expression in the ectoderm
increased amount tril.S expression in the ectoderm
increased amount trim45.L expression in the ectoderm
increased amount ttc34.L expression in the ectoderm
increased amount tubb6.L expression in the ectoderm
increased amount tuft1.L expression in the ectoderm
increased amount tulp4.S expression in the ectoderm
decreased amount txn.L expression in the ectoderm
increased amount ube2e2.L expression in the ectoderm
increased amount ube2e2.S expression in the ectoderm
increased amount ulk1.S expression in the ectoderm
decreased amount unc45b.L expression in the ectoderm
increased amount unc93a.2.L expression in the ectoderm
increased amount usp2.S expression in the ectoderm
increased amount vegt.L expression in the ectoderm
increased amount vegt.S expression in the ectoderm
decreased amount ventx1.1.S expression in the ectoderm
decreased amount vwc2l.2.L expression in the ectoderm
increased amount wdr88.L expression in the ectoderm
decreased amount wfdc2.L expression in the ectoderm
increased amount wnt5b.L expression in the ectoderm
increased amount wnt8a.L expression in the ectoderm
increased amount XB22062458.L [provisional] expression in the ectoderm
decreased amount XB22063314.L [provisional:yrdc] expression in the ectoderm
increased amount XB22065716.L [provisional] expression in the ectoderm
decreased amount XB22164556.S [provisional] expression in the ectoderm
increased amount XB5786944.L [provisional:lnx2] expression in the ectoderm
increased amount XB5848002.L [provisional] expression in the ectoderm
decreased amount XB5848002.S [provisional] expression in the ectoderm
increased amount XB5873314.L [provisional:rab32] expression in the ectoderm
decreased amount XB5964940.L [provisional] expression in the ectoderm
increased amount XB987369.L [provisional:prss12] expression in the ectoderm
decreased amount xepsin.L expression in the ectoderm
increased amount ypel2.L expression in the ectoderm
increased amount zeb2.S expression in the ectoderm
increased amount zic2.L expression in the ectoderm
increased amount zic3.L expression in the ectoderm
increased amount zic3.S expression in the ectoderm
increased amount znf287.S expression in the ectoderm
increased amount znf534.S expression in the ectoderm
GEO Series: GSE92366: Xenbase, NCBI
Article: XB-ART-54691, PubMed