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XB-PHENO-25192

Xtr Wt + irx3 + otx2 + animal cap explant,

Experiment + Assay: Xtr Wt + irx3 + otx2 + animal cap explant + animal cap NF10.5 (RNA-Seq (RNA))
Background: Xtr.Outbred
Manipulations:
Manipulation Type Reagent Target Gene Stage Treatment Area
mRNA injection irx3 irx3
NF stage 1 animal pole
mRNA injection otx2 otx2
NF stage 1 animal pole
explant  
NF stage 8 animal cap
Conditions:
Assay Type Assay Stages Antibody
RNA-Seq NF stage 10.5 to NF stage 10.5  
Expression Phenotypes (247):
increased amount abca1 expression in the animal cap
decreased amount abo.3 expression in the animal cap
decreased amount acer1 expression in the animal cap
increased amount admp expression in the animal cap
increased amount adrb2 expression in the animal cap
decreased amount aldh1l1 expression in the animal cap
increased amount alkal1 expression in the animal cap
increased amount amer2 expression in the animal cap
decreased amount anks6 expression in the animal cap
decreased amount ano9 expression in the animal cap
increased amount apoc1 expression in the animal cap
increased amount areg expression in the animal cap
increased amount arhgef9 expression in the animal cap
decreased amount astl2d.1 expression in the animal cap
increased amount astl2d.4 expression in the animal cap
decreased amount bambi expression in the animal cap
increased amount barhl1 expression in the animal cap
increased amount barhl2 expression in the animal cap
increased amount bhlhe22 expression in the animal cap
decreased amount bmp7.1 expression in the animal cap
decreased amount bspry expression in the animal cap
decreased amount c22orf15 expression in the animal cap
increased amount c4orf54 expression in the animal cap
increased amount c5 expression in the animal cap
decreased amount capn8.1 expression in the animal cap
decreased amount capn8.3 expression in the animal cap
increased amount ccn1 expression in the animal cap
decreased amount cdh26 expression in the animal cap
decreased amount cdx2 expression in the animal cap
decreased amount cdx4 expression in the animal cap
increased amount cebpb expression in the animal cap
decreased amount cfap161 expression in the animal cap
increased amount cfap95 expression in the animal cap
increased amount chrd.1 expression in the animal cap
decreased amount cks1b expression in the animal cap
decreased amount cnfn.1 expression in the animal cap
increased amount cnga2 expression in the animal cap
increased amount crisp1.6 expression in the animal cap
decreased amount cspg5 expression in the animal cap
increased amount dapp1 expression in the animal cap
decreased amount daw1 expression in the animal cap
decreased amount degs3 expression in the animal cap
decreased amount dgka expression in the animal cap
decreased amount dlc expression in the animal cap
decreased amount dlx3 expression in the animal cap
decreased amount dlx5 expression in the animal cap
increased amount dmbx1 expression in the animal cap
decreased amount elapor2 expression in the animal cap
increased amount elf5 expression in the animal cap
decreased amount elovl3 expression in the animal cap
increased amount emx2 expression in the animal cap
increased amount en2 expression in the animal cap
increased amount etv3l expression in the animal cap
decreased amount evx1 expression in the animal cap
decreased amount fa2h expression in the animal cap
decreased amount faah.2 expression in the animal cap
increased amount faxc expression in the animal cap
decreased amount fbln7 expression in the animal cap
increased amount fezf2 expression in the animal cap
increased amount fgfbp2 expression in the animal cap
increased amount fhl5 expression in the animal cap
increased amount fli1 expression in the animal cap
increased amount flrt3 expression in the animal cap
increased amount foxa1 expression in the animal cap
increased amount foxa2 expression in the animal cap
increased amount foxd4l1.1 expression in the animal cap
increased amount foxd4l1.2 expression in the animal cap
decreased amount foxf1 expression in the animal cap
decreased amount foxi1 expression in the animal cap
decreased amount foxi4.2 expression in the animal cap
decreased amount foxj1 expression in the animal cap
decreased amount foxj1.2 expression in the animal cap
decreased amount foxn4 expression in the animal cap
increased amount frem1 expression in the animal cap
increased amount fst expression in the animal cap
increased amount gad1.1 expression in the animal cap
decreased amount gadd45a expression in the animal cap
decreased amount gadd45b expression in the animal cap
decreased amount gadd45g expression in the animal cap
decreased amount gata2 expression in the animal cap
decreased amount gata3 expression in the animal cap
decreased amount gatm expression in the animal cap
decreased amount gcnt4 expression in the animal cap
decreased amount gfpt1 expression in the animal cap
decreased amount gmnc expression in the animal cap
increased amount gnat1 expression in the animal cap
increased amount grk7 expression in the animal cap
decreased amount gs17 expression in the animal cap
increased amount gsc expression in the animal cap
increased amount gsg1l expression in the animal cap
increased amount gsx1 expression in the animal cap
increased amount habp4 expression in the animal cap
increased amount hand2 expression in the animal cap
decreased amount hbz expression in the animal cap
decreased amount hes5.3 expression in the animal cap
decreased amount hes5.4 expression in the animal cap
increased amount hes7.1 expression in the animal cap
increased amount homeobox100496651-provisional expression in the animal cap
decreased amount hoxa1 expression in the animal cap
increased amount hoxb5 expression in the animal cap
increased amount hoxb6 expression in the animal cap
increased amount hoxb8 expression in the animal cap
decreased amount hoxd1 expression in the animal cap
increased amount hs3st6 expression in the animal cap
decreased amount id2 expression in the animal cap
increased amount ina expression in the animal cap
increased amount irx3 expression in the animal cap
decreased amount kcne5 expression in the animal cap
decreased amount klf17 expression in the animal cap
decreased amount klf2 expression in the animal cap
decreased amount klf5 expression in the animal cap
decreased amount lgalsl expression in the animal cap
increased amount lhx1 expression in the animal cap
decreased amount lhx3 expression in the animal cap
increased amount lhx9 expression in the animal cap
increased amount lmo2 expression in the animal cap
increased amount lrfn1.2 expression in the animal cap
increased amount lrit1 expression in the animal cap
increased amount lrrc4 expression in the animal cap
increased amount maf expression in the animal cap
increased amount map3k12 expression in the animal cap
increased amount masp1 expression in the animal cap
decreased amount mcidas expression in the animal cap
increased amount menf.1 expression in the animal cap
increased amount menf.2 expression in the animal cap
decreased amount mfsd2a expression in the animal cap
decreased amount mgc75872 expression in the animal cap
decreased amount mid1ip1 expression in the animal cap
decreased amount mmp11 expression in the animal cap
decreased amount mmp25 expression in the animal cap
increased amount mmp8 expression in the animal cap
increased amount mrap expression in the animal cap
decreased amount msx1 expression in the animal cap
decreased amount msx2 expression in the animal cap
increased amount mtus2 expression in the animal cap
decreased amount muc4 expression in the animal cap
decreased amount myb expression in the animal cap
increased amount myh7 expression in the animal cap
increased amount neto1 expression in the animal cap
increased amount nfkbia expression in the animal cap
decreased amount nkx1-2 expression in the animal cap
increased amount nkx2-3 expression in the animal cap
increased amount nkx6-2 expression in the animal cap
increased amount nog expression in the animal cap
increased amount nrp1 expression in the animal cap
decreased amount odad2 expression in the animal cap
decreased amount odf3 expression in the animal cap
increased amount olig3 expression in the animal cap
increased amount osr1 expression in the animal cap
increased amount otp expression in the animal cap
increased amount otx2 expression in the animal cap
increased amount pax2 expression in the animal cap
increased amount pcdh8 expression in the animal cap
increased amount pcdhga11 expression in the animal cap
increased amount pde6a expression in the animal cap
decreased amount pim1 expression in the animal cap
increased amount pkdcc.2 expression in the animal cap
decreased amount pla2g7 expression in the animal cap
decreased amount plxna2 expression in the animal cap
decreased amount post6 expression in the animal cap
increased amount prdm13 expression in the animal cap
increased amount prdm16 expression in the animal cap
increased amount prf1 expression in the animal cap
increased amount prkg1 expression in the animal cap
increased amount prom1 expression in the animal cap
increased amount prtg expression in the animal cap
decreased amount ptger4 expression in the animal cap
decreased amount pycard expression in the animal cap
decreased amount rab3d expression in the animal cap
decreased amount rara expression in the animal cap
increased amount rasgef1a expression in the animal cap
decreased amount rbm47 expression in the animal cap
increased amount rnf152 expression in the animal cap
increased amount rspo3 expression in the animal cap
increased amount sdk2 expression in the animal cap
increased amount sh3kbp1 expression in the animal cap
increased amount six3 expression in the animal cap
decreased amount slc13a4l expression in the animal cap
decreased amount slc17a9 expression in the animal cap
decreased amount slc27a2 expression in the animal cap
decreased amount slc2a2 expression in the animal cap
decreased amount slc7a8 expression in the animal cap
increased amount slc8a1 expression in the animal cap
increased amount slitrk4 expression in the animal cap
decreased amount smad9 expression in the animal cap
increased amount snai1 expression in the animal cap
decreased amount socs3l expression in the animal cap
increased amount sox1 expression in the animal cap
increased amount sox17a expression in the animal cap
increased amount sp5 expression in the animal cap
increased amount sp9 expression in the animal cap
increased amount spib expression in the animal cap
increased amount spon2 expression in the animal cap
decreased amount sptlc3 expression in the animal cap
decreased amount st6galnac2 expression in the animal cap
decreased amount stard10 expression in the animal cap
decreased amount stard13 expression in the animal cap
increased amount sycp3 expression in the animal cap
decreased amount szl expression in the animal cap
increased amount tacc2 expression in the animal cap
decreased amount tbx3 expression in the animal cap
decreased amount tead4 expression in the animal cap
increased amount tfap2b expression in the animal cap
increased amount tfap2d expression in the animal cap
increased amount thsd1 expression in the animal cap
increased amount tlr2 expression in the animal cap
increased amount tlx3 expression in the animal cap
increased amount tmem229a expression in the animal cap
decreased amount trex2 expression in the animal cap
decreased amount tspo expression in the animal cap
decreased amount tuba1cl.1 expression in the animal cap
decreased amount tuba1cl.2 expression in the animal cap
decreased amount tuba1cl.3 expression in the animal cap
increased amount tubb3 expression in the animal cap
decreased amount ubp1 expression in the animal cap
decreased amount ugdhl expression in the animal cap
decreased amount ugt3a2 expression in the animal cap
decreased amount upk2 expression in the animal cap
increased amount upp1 expression in the animal cap
increased amount vegfb expression in the animal cap
decreased amount ventx1.1 expression in the animal cap
decreased amount ventx1.2 expression in animal cap
decreased amount ventx2.1 expression in the animal cap
increased amount vepp1 expression in the animal cap
decreased amount vgll1 expression in the animal cap
decreased amount vill expression in the animal cap
decreased amount vtcn1 expression in the animal cap
increased amount wnt1 expression in the animal cap
increased amount wnt2b expression in the animal cap
decreased amount XB22041731 [provisional] expression in the animal cap
decreased amount XB5717875 [provisional:plac8] expression in the animal cap
decreased amount XB5767169 [provisional] expression in the animal cap
decreased amount XB5814120 [provisional] expression in the animal cap
increased amount XB5848002 [provisional] expression in the animal cap
decreased amount XB5856846 [provisional] expression in the animal cap
decreased amount XB5872372 [provisional] expression in the animal cap
increased amount XB5882685 [provisional:cdca7] expression in the animal cap
decreased amount XB5894678 [provisional:btnl10] expression in the animal cap
decreased amount XB5922676 [provisional:cav3] expression in the animal cap
decreased amount XB5947713 [provisional] expression in the animal cap
decreased amount XB5967085 [provisional] expression in the animal cap
increased amount zfhx4 expression in the animal cap
increased amount znf155 expression in the animal cap
increased amount znf367 expression in the animal cap
decreased amount znf484 expression in the animal cap
decreased amount znf534 expression in the animal cap
decreased amount znf703 expression in the animal cap
GEO Series: GSE145619: Xenbase, NCBI
Article: XB-ART-57688, PubMed