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Summary Expression Phenotypes Gene Literature (30) GO Terms (4) Nucleotides (117) Proteins (35) Interactants (61) Wiki
XB-GENEPAGE-1013551

Papers associated with cpd



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Acquisition of new function through gene duplication in the metallocarboxypeptidase family., Fajardo D, Saint Jean R, Lyons PJ., Sci Rep. February 13, 2023; 13 (1): 2512.              

The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II., van der Weegen Y, Golan-Berman H, Mevissen TET, Apelt K, González-Prieto R, Goedhart J, Heilbrun EE, Vertegaal ACO, van den Heuvel D, Walter JC, Adar S, Luijsterburg MS., Nat Commun. April 30, 2020; 11 (1): 2104.              

Coulomb and CH-π interactions in (6-4) photolyase-DNA complex dominate DNA binding and repair abilities., Terai Y, Sato R, Yumiba T, Harada R, Shimizu K, Toga T, Ishikawa-Fujiwara T, Todo T, Iwai S, Shigeta Y, Yamamoto J., Nucleic Acids Res. July 27, 2018; 46 (13): 6761-6772.              

Functional Conversion of CPD and (6-4) Photolyases by Mutation., Yamada D, Dokainish HM, Iwata T, Yamamoto J, Ishikawa T, Todo T, Iwai S, Getzoff ED, Kitao A, Kandori H., Biochemistry. August 2, 2016; 55 (30): 4173-83.

Structural Changes of the Active Center during the Photoactivation of Xenopus (6-4) Photolyase., Yamada D, Yamamoto J, Zhang Y, Iwata T, Hitomi K, Getzoff ED, Iwai S, Kandori H., Biochemistry. February 2, 2016; 55 (4): 715-23.

Structural role of two histidines in the (6-4) photolyase reaction., Yamada D, Iwata T, Yamamoto J, Hitomi K, Todo T, Iwai S, Getzoff ED, Kandori H., Biophys Physicobiol. December 22, 2015; 12 139-44.        

Interactive effects of ultraviolet-B radiation and pesticide exposure on DNA photo-adduct accumulation and expression of DNA damage and repair genes in Xenopus laevis embryos., Yu S, Yu S, Tang S, Mayer GD, Cobb GP, Maul JD., Aquat Toxicol. February 1, 2015; 159 256-66.

DNA Ligases I and III Support Nucleotide Excision Repair in DT40 Cells with Similar Efficiency., Paul-Konietzko K, Thomale J, Arakawa H, Iliakis G., Photochem Photobiol. January 1, 2015; 91 (5): 1173-80.

Molecular dissection of the domain architecture and catalytic activities of human PrimPol., Keen BA, Jozwiakowski SK, Bailey LJ, Bianchi J, Doherty AJ., Nucleic Acids Res. May 1, 2014; 42 (9): 5830-45.                    

PrimPol bypasses UV photoproducts during eukaryotic chromosomal DNA replication., Bianchi J, Rudd SG, Jozwiakowski SK, Bailey LJ, Soura V, Taylor E, Stevanovic I, Green AJ, Stracker TH, Lindsay HD, Doherty AJ., Mol Cell. November 21, 2013; 52 (4): 566-73.          

Conformational changes underlying pore dilation in the cytoplasmic domain of mammalian inward rectifier K+ channels., Inanobe A, Nakagawa A, Kurachi Y., PLoS One. January 1, 2013; 8 (11): e79844.              

FTIR study of light-dependent activation and DNA repair processes of (6-4) photolyase., Zhang Y, Zhang Y, Iwata T, Yamamoto J, Hitomi K, Iwai S, Todo T, Getzoff ED, Kandori H., Biochemistry. May 10, 2011; 50 (18): 3591-8.

Rotational position of a 5-methylcytosine-containing cyclobutane pyrimidine dimer in a nucleosome greatly affects its deamination rate., Song Q, Cannistraro VJ, Taylor JS., J Biol Chem. February 25, 2011; 286 (8): 6329-35.

Positively charged residues located downstream of PIP box, together with TD amino acids within PIP box, are important for CRL4(Cdt2) -mediated proteolysis., Michishita M, Morimoto A, Ishii T, Komori H, Shiomi Y, Higuchi Y, Nishitani H., Genes Cells. January 1, 2011; 16 (1): 12-22.        

UV damage in DNA promotes nucleosome unwrapping., Duan MR, Smerdon MJ., J Biol Chem. August 20, 2010; 285 (34): 26295-303.            

Light-induced activation of class II cyclobutane pyrimidine dimer photolyases., Okafuji A, Biskup T, Hitomi K, Getzoff ED, Kaiser G, Batschauer A, Bacher A, Hidema J, Teranishi M, Yamamoto K, Schleicher E, Weber S., DNA Repair (Amst). May 4, 2010; 9 (5): 495-505.

Induction of (6-4) photolyase gene transcription by blue light in Xenopus A6 cells., Fukushima N, Naito Y, Ryoji M., Biochem Biophys Res Commun. May 29, 2009; 383 (2): 231-4.

UVB dose-toxicity thresholds and steady-state DNA-photoproduct levels during chronic irradiation of inbred Xenopus laevis tadpoles., Pandelova I, Hewitt SR, Rollins-Smith LA, Hays JB., Photochem Photobiol. January 1, 2006; 82 (4): 1080-7.

Purification, cDNA cloning, and expression profiles of the cyclobutane pyrimidine dimer photolyase of Xenopus laevis., Tanida H, Tahara E, Mochizuki M, Yamane Y, Ryoji M., FEBS J. December 1, 2005; 272 (23): 6098-108.

DNA polymerases eta and kappa are responsible for error-free translesion DNA synthesis activity over a cis-syn thymine dimer in Xenopus laevis oocyte extracts., Yagi Y, Ogawara D, Iwai S, Hanaoka F, Akiyama M, Maki H., DNA Repair (Amst). November 21, 2005; 4 (11): 1252-69.

Inhibition of nucleotide excision repair by high mobility group protein HMGA1., Adair JE, Kwon Y, Dement GA, Smerdon MJ, Reeves R., J Biol Chem. September 16, 2005; 280 (37): 32184-92.

Fluoroimaging-based immunoassay of DNA photoproducts in ultraviolet-B-irradiated tadpoles., Pandelova I, Hewitt SR, Hays JB., Methods Mol Biol. January 1, 2005; 291 29-38.

Nucleotide excision repair in oocyte nuclear extracts from Xenopus laevis., Ackerman EJ, Iakoucheva LM., Methods. October 1, 2000; 22 (2): 188-93.

Nucleotide excision repair of the 5 S ribosomal RNA gene assembled into a nucleosome., Liu X, Smerdon MJ., J Biol Chem. August 4, 2000; 275 (31): 23729-35.

Ultraviolet damage and nucleosome folding of the 5S ribosomal RNA gene., Liu X, Mann DB, Suquet C, Springer DL, Smerdon MJ., Biochemistry. January 25, 2000; 39 (3): 557-66.

Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene., Conconi A, Liu X, Koriazova L, Ackerman EJ, Smerdon MJ., EMBO J. March 1, 1999; 18 (5): 1387-96.

Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation., Liu X, Conconi A, Smerdon MJ., Biochemistry. November 4, 1997; 36 (44): 13710-7.

Photorepair mutants of Arabidopsis., Jiang CZ, Yee J, Mitchell DL, Britt AB., Proc Natl Acad Sci U S A. July 8, 1997; 94 (14): 7441-5.

Flavin adenine dinucleotide as a chromophore of the Xenopus (6-4)photolyase., Todo T, Kim ST, Hitomi K, Otoshi E, Inui T, Morioka H, Kobayashi H, Ohtsuka E, Toh H, Ikenaga M., Nucleic Acids Res. February 15, 1997; 25 (4): 764-8.

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