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Summary Expression Phenotypes Gene Literature (265) GO Terms (14) Nucleotides (594) Proteins (50) Interactants (1404) Wiki
XB--484814

Papers associated with sox3



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referenced by:

Xenopus Sox11 Partner Proteins and Functional Domains in Neurogenesis., Singleton KS, Silva-Rodriguez P, Cunningham DD, Silva EM., Genes (Basel). February 15, 2024; 15 (2):         

ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C, Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y, Qi X, Cai D, Mao B, Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H., EMBO Rep. February 1, 2024; 25 (2): 646-671.                                          

Early life exposure to perfluorooctanesulfonate (PFOS) impacts vital biological processes in Xenopus laevis: Integrated morphometric and transcriptomic analyses., Ismail T, Lee HK, Lee H, Kim Y, Kim E, Lee JY, Kim KB, Ryu HY, Cho DH, Kwon TK, Park TJ, Kwon T, Lee HS, Lee HS., Ecotoxicol Environ Saf. January 1, 2024; 269 115820.                      

Prdm15 acts upstream of Wnt4 signaling in anterior neural development of Xenopus laevis., Saumweber E, Mzoughi S, Khadra A, Werberger A, Schumann S, Guccione E, Schmeisser MJ, Kühl SJ., Front Cell Dev Biol. January 1, 2024; 12 1316048.                            

Solubility phase transition of maternal RNAs during vertebrate oocyte-to-embryo transition., Hwang H, Chen S, Ma M, Divyanshi, Fan HC, Borwick E, Böke E, Mei W, Yang J., Dev Cell. December 4, 2023; 58 (23): 2776-2788.e5.                          

Water contamination by delorazepam induces epigenetic defects in the embryos of the clawed frog Xenopus laevis., Fogliano C, Motta CM, Acloque H, Avallone B, Carotenuto R., Sci Total Environ. October 20, 2023; 896 165300.          

Hybridization led to a rewired pluripotency network in the allotetraploid Xenopus laevis., Phelps WA, Hurton MD, Ayers TN, Carlson AE, Rosenbaum JC, Lee MT., Elife. October 3, 2023; 12                             

Phenotype-genotype relationships in Xenopus sox9 crispants provide insights into campomelic dysplasia and vertebrate jaw evolution., Hossain N, Igawa T, Suzuki M, Tazawa I, Nakao Y, Hayashi T, Suzuki N, Ogino H., Dev Growth Differ. October 1, 2023; 65 (8): 481-497.                  

A single-cell, time-resolved profiling of Xenopus mucociliary epithelium reveals nonhierarchical model of development., Lee J, Møller AF, Chae S, Bussek A, Park TJ, Kim Y, Lee HS, Pers TH, Kwon T, Sedzinski J, Natarajan KN., Sci Adv. April 7, 2023; 9 (14): eadd5745.                                                          

The heparan sulfate modification enzyme, Hs6st1, governs Xenopus neuroectodermal patterning by regulating distributions of Fgf and Noggin., Yamamoto T, Kaneshima T, Tsukano K, Michiue T., Dev Biol. April 1, 2023; 496 87-94.

Ndst1, a heparan sulfate modification enzyme, regulates neuroectodermal patterning by enhancing Wnt signaling in Xenopus., Yamamoto T, Kambayashi Y, Tsukano K, Michiue T., Dev Growth Differ. April 1, 2023; 65 (3): 153-160.              

Production and characterization of monoclonal antibodies to Xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 15, 2023; 150 (4):               

Production and characterization of monoclonal antibodies to xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 14, 2023;                 

ADAM11 a novel regulator of Wnt and BMP4 signaling in neural crest and cancer., Pandey A, Cousin H, Horr B, Alfandari D, Alfandari D., Front Cell Dev Biol. January 1, 2023; 11 1271178.                      

Alcohol induces neural tube defects by reducing retinoic acid signaling and promoting neural plate expansion., Edri T, Cohen D, Shabtai Y, Fainsod A., Front Cell Dev Biol. January 1, 2023; 11 1282273.                    

Ash2l, an obligatory component of H3K4 methylation complexes, regulates neural crest development., Mohammadparast S, Chang C., Dev Biol. December 1, 2022; 492 14-24.                                  

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.                                  

Functions of block of proliferation 1 during anterior development in Xenopus laevis., Gärtner C, Meßmer A, Dietmann P, Kühl M, Kühl SJ., PLoS One. August 2, 2022; 17 (8): e0273507.                        

Xenopus Dusp6 modulates FGF signaling to precisely pattern pre-placodal ectoderm., Tsukano K, Yamamoto T, Watanabe T, Michiue T., Dev Biol. August 1, 2022; 488 81-90.                          

Distinct spatiotemporal contribution of morphogenetic events and mechanical tissue coupling during Xenopus neural tube closure., Christodoulou N, Skourides PA., Development. July 1, 2022; 149 (13):                 

Influence of Sox protein SUMOylation on neural development and regeneration., Chang KC., Neural Regen Res. March 1, 2022; 17 (3): 477-481.      

Impact of glyphosate-based herbicide on early embryonic development of the amphibian Xenopus laevis., Flach H, Lenz A, Pfeffer S, Kühl M, Kühl SJ., Aquat Toxicol. March 1, 2022; 244 106081.

The Ribosomal Protein L5 Functions During Xenopus Anterior Development Through Apoptotic Pathways., Schreiner C, Kernl B, Dietmann P, Riegger RJ, Kühl M, Kühl SJ., Front Cell Dev Biol. January 1, 2022; 10 777121.                        

Retinoic Acid is Required for Normal Morphogenetic Movements During Gastrulation., Gur M, Edri T, Moody SA, Fainsod A., Front Cell Dev Biol. January 1, 2022; 10 857230.                  

Collective durotaxis along a self-generated stiffness gradient in vivo., Shellard A, Mayor R., Nature. December 1, 2021; 600 (7890): 690-694.

The DNA-to-cytoplasm ratio broadly activates zygotic gene expression in Xenopus., Jukam D, Kapoor RR, Straight AF, Skotheim JM., Curr Biol. October 11, 2021; 31 (19): 4269-4281.e8.                          

Foxm1 regulates neural progenitor fate during spinal cord regeneration., Pelzer D, Phipps LS, Thuret R, Gallardo-Dodd CJ, Baker SM, Dorey K., EMBO Rep. September 6, 2021; 22 (9): e50932.                        

Sex chromosome degeneration, turnover, and sex-biased expression of sex-linked transcripts in African clawed frogs (Xenopus)., Song XY, Furman BLS, Premachandra T, Knytl M, Cauret CMS, Wasonga DV, Measey J, Dworkin I, Evans BJ., Philos Trans R Soc Lond B Biol Sci. August 30, 2021; 376 (1832): 20200095.

The dual-specificity protein kinase Clk3 is essential for Xenopus neural development., Virgirinia RP, Nakamura M, Takebayashi-Suzuki K, Fatchiyah F, Suzuki A., Biochem Biophys Res Commun. August 27, 2021; 567 99-105.                                  

Retinol binding protein 1 affects Xenopus anterior neural development via all-trans retinoic acid signaling., Flach H, Basten T, Schreiner C, Dietmann P, Greco S, Nies L, Roßmanith N, Walter S, Kühl M, Kühl SJ., Dev Dyn. August 1, 2021; 250 (8): 1096-1112.                

Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J, Wielath FM, Vick P., Biol Open. July 15, 2021; 10 (7):                                           

The dorsal blastopore lip is a source of signals inducing planar cell polarity in the Xenopus neural plate., Mancini P, Ossipova O, Sokol SY., Biol Open. July 15, 2021; 10 (7):                 

Independent pseudogenizations and losses of sox15 during amniote diversification following asymmetric ohnolog evolution., Ogita Y, Tamura K, Mawaribuchi S, Takamatsu N, Ito M., BMC Ecol Evol. June 30, 2021; 21 (1): 134.        

Kindlin2 regulates neural crest specification via integrin-independent regulation of the FGF signaling pathway., Wang H, Wang C, Wang C, Wang C, Long Q, Zhang Y, Wang M, Liu J, Qi X, Cai D, Lu G, Sun J, Yao YG, Chan WY, Chan WY, Deng Y, Zhao H., Development. May 15, 2021; 148 (10):                                           

Cellular response to spinal cord injury in regenerative and non-regenerative stages in Xenopus laevis., Edwards-Faret G, González-Pinto K, Cebrián-Silla A, Peñailillo J, García-Verdugo JM, Larraín J., Neural Dev. February 2, 2021; 16 (1): 2.                              

Neural tube closure requires the endocytic receptor Lrp2 and its functional interaction with intracellular scaffolds., Kowalczyk I, Lee C, Lee C, Schuster E, Hoeren J, Trivigno V, Riedel L, Görne J, Wallingford JB, Hammes A, Feistel K., Development. January 26, 2021; 148 (2):                                   

Otic Neurogenesis in Xenopus laevis: Proliferation, Differentiation, and the Role of Eya1., Almasoudi SH, Schlosser G., Front Neuroanat. January 1, 2021; 15 722374.                                                    

Interplay of TRIM2 E3 Ubiquitin Ligase and ALIX/ESCRT Complex: Control of Developmental Plasticity During Early Neurogenesis., Lokapally A, Neuhaus H, Herfurth J, Hollemann T., Cells. July 20, 2020; 9 (7):                                           

Dach1 regulates neural crest migration during embryonic development., Kim YK, Lee H, Ismail T, Kim Y, Lee HS., Biochem Biophys Res Commun. July 5, 2020; 527 (4): 896-901.        

Mcl1 protein levels and Caspase-7 executioner protease control axial organizer cells survival., Sena E, Bou-Rouphael J, Rocques N, Carron-Homo C, Durand BC., Dev Dyn. July 1, 2020; 249 (7): 847-866.              

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

Model systems for regeneration: Xenopus., Phipps LS, Marshall L, Dorey K, Amaya E., Development. March 19, 2020; 147 (6):           

The tumor suppressor PTPRK promotes ZNRF3 internalization and is required for Wnt inhibition in the Spemann organizer., Chang LS, Kim M, Glinka A, Reinhard C, Niehrs C., Elife. January 14, 2020; 9                                                                                               

Maternal pluripotency factors initiate extensive chromatin remodelling to predefine first response to inductive signals., Gentsch GE, Spruce T, Owens NDL, Smith JC., Nat Commun. September 19, 2019; 10 (1): 4269.                                        

Single Amino Acid Change Underlies Distinct Roles of H2A.Z Subtypes in Human Syndrome., Greenberg RS, Long HK, Swigut T, Wysocka J., Cell. September 5, 2019; 178 (6): 1421-1436.e24.                                

Cdc2-like kinase 2 (Clk2) promotes early neural development in Xenopus embryos., Virgirinia RP, Jahan N, Okada M, Takebayashi-Suzuki K, Yoshida H, Nakamura M, Akao H, Yoshimoto Y, Fatchiyah F, Ueno N, Suzuki A., Dev Growth Differ. August 1, 2019; 61 (6): 365-377.                              

Mechanistic insights from the LHX1-driven molecular network in building the embryonic head., McMahon R, Sibbritt T, Salehin N, Osteil P, Tam PPL., Dev Growth Differ. June 1, 2019; 61 (5): 327-336.

Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/β-Catenin response driving Spemann organizer formation., Sena E, Rocques N, Borday C, Muhamad Amin HS, Parain K, Sitbon D, Chesneau A, Durand BC., Development. May 22, 2019; 146 (10):                                             

Peroxiredoxin5 Controls Vertebrate Ciliogenesis by Modulating Mitochondrial Reactive Oxygen Species., Ji Y, Chae S, Lee HK, Park I, Kim C, Ismail T, Kim Y, Park JW, Kwon OS, Kang BS, Lee DS, Bae JS, Kim SH, Moon PG, Baek MC, Park MJ, Kil IS, Rhee SG, Kim J, Huh YH, Shin JY, Min KJ, Kwon TK, Jang DG, Woo HA, Kwon T, Park TJ, Lee HS., Antioxid Redox Signal. May 10, 2019; 30 (14): 1731-1745.  

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