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XB-GENEPAGE-480587
pnhd pinhead
Anatomical Phenotypes
Phenotypes manually curated with terms from the Xenopus phenotype ontology
covering anatomical, gene ontology, and neurobehavioral phenotypes.
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| decreased size of the head region (4 sources), increased size of the trunk (3 sources), abnormally anterioralized embryo (2 sources), abnormally posterioralized embryo (2 sources), absent cement gland (2 sources), decreased size of the tail bud (2 sources), decreased width of the head (2 sources), increased size of the head (2 sources), increased size of the tail bud (2 sources), abnormal axis specification (1 source), abnormal head morphology (1 source), abnormal trunk morphology (1 source), absent head (1 source), decreased size of the fin (1 source), decreased size of the notochord (1 source), edematous embryo (1 source), edematous ventral trunk (1 source), increased size of the ventral trunk (1 source), partially ventralized embryo (1 source) |
| Expression Phenotypes
Gene expression phenotype annotations where the gene of interest has been
disrupted (manipulated) or is the gene assayed (assayed). Computed annotations are derived from
differential expression analysis from Xenbase processed GEO data with the criteria of a TPM >= 1,
FDR <= 0.05 and an absolute LogFC >= 2.
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| Manual annotations: pnhd manipulated (26 sources), pnhd assayed (2 sources) |
| Computed annotations: pnhd manipulated (2 sources), pnhd assayed (35 sources) |
| Experiments (Reagents)
These are short form descriptions of experiments using reagents targeting
the gene of interest.
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| Xla Wt + pnhd MO (5 sources), Xla Wt + pnhd + animal cap explant (4 sources), Xla Wt + pnhd + animal cap explant (3 sources), Xla Wt + pnhd-FLAG (3 sources), Xla Wt + pnhd-FLAG + animal cap explant (3 sources), Xla Wt + pnhd MO (3 sources), Xla Wt + pnhd (2 sources), Xla Wt + pnhd MO + marginal zone explant (2 sources), Xla Wt + Xla.pnhd-FLAG (2 sources), Xla Wt + pnhd.L + animal cap explant (1 source), Xla Wt + pnhd MO (1 source), Xla Wt + pnhd MO (1 source), Xla Wt + pnhd MO + marginal zone explant (1 source), Xla Wt + Xla.pnhd-FLAG (1 source), Xla Wt + Xla.pnhd-FLAG (1 source), Xla Wt + Xla.pnhd-FLAG + animal cap explant (1 source), Xla Wt + Xla.pnhd-FLAG + animal cap explant (1 source), Xtr Wt + pnhd MO (1 source), Xtr Wt + pnhd MO (1 source) |