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Summary Expression Phenotypes Gene Literature (198) GO Terms (4) Nucleotides (271) Proteins (49) Interactants (1678) Wiki
XB-GENEPAGE-490377

msx1     msh homeobox 1

Anatomical Phenotypes
Phenotypes manually curated with terms from the Xenopus phenotype ontology covering anatomical, gene ontology, and neurobehavioral phenotypes.
abnormal tail morphology (2 sources), abnormal bending of tail (1 source), abnormal development of neural crest (1 source), abnormal swimming behavior (1 source)
Expression Phenotypes
Gene expression phenotype annotations where the gene of interest has been disrupted (manipulated) or is the gene assayed (assayed). Computed annotations are derived from differential expression analysis from Xenbase processed GEO data with the criteria of a TPM >= 1, FDR <= 0.05 and an absolute LogFC >= 2.
Manual annotations: msx1 manipulated (12 sources), msx1 assayed (19 sources)
Computed annotations: msx1 assayed (19 sources)
Experiments (Reagents)
These are short form descriptions of experiments using reagents targeting the gene of interest.
Xla Wt + msx1 (6 sources), Xla Wt + msx1 MO (5 sources), Xtr Wt + msx1 MO (3 sources), Xla Wt + hmga2 + msx1 (1 source)
Monarch Ortholog Phenotypes
These phenotypes are associated with this gene with a has phenotype relation via Monarch.
Human (29 sources): Abnormal fingernail morphology, Abnormality of dental morphology, Abnormality of the dentition, Abnormality of the face, Abnormality of the nail, Agenesis of permanent teeth, Cleft palate, Cleft upper lip, Concave nail, Conical tooth, [+]
Mouse (38 sources): abnormal brain commissure morphology, abnormal breathing pattern, abnormal cranium morphology, abnormal diencephalon morphology, abnormal embryo size, abnormal embryonic tissue morphology, abnormal epitympanic recess morphology, abnormal frontal bone morphology, abnormal liver development, abnormal mandible morphology, [+]

View all ortholog results at Monarch