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Summary Expression Gene Literature (28) GO Terms (26) Nucleotides (126) Proteins (49) Interactants (865) Wiki
XB-GENEPAGE-478921
Gene Symbol:
foxf1

Gene Name:
forkhead box F1

Synonyms:
xfd-13 , fkhl5 , acdmpv , freac1 , foxf1-a , foxf1-b ( Add synonyms , Nomenclature history )

Gene Function:
forkhead domain transcription factor

Protein Function :
Probable transcription factor. Required for smooth muscle (visceral mesoderm) differentiation during gut development. Also required for normal proliferation of the lateral plate mesoderm. Acts as a dow...[+]


InterPro :
Cryptochr/Photolyase FAD-bd , Rossmann-like a/b/a fold , DNA photolyase N , Crypto/Photolyase FAD-like sf [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
persistent fetal circulation syndrome

OMIM:
ALVEOLAR CAPILLARY DYSPLASIA WITH MISALIGNMENT OF PULMONARY VEINS; ACDMPV

External Links:
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Xenbase Gene ID XB-GENE-478922 XB-GENE-865226 XB-GENE-6254084
Gene Symbol foxf1 foxf1.L foxf1.S
Chromosome Chr4 chr4L chr4S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 734087
399398
735218
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine foxf1 foxf1.L foxf1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards FOXF1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Foxf1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Foxf1 Ensembl
zebrafish
ZFIN, AGR foxf1 ZFIN Ensembl
chicken
GEISHA FOXF1 Ensembl
fruit fly
worm
Publications
First Genomic structure and embryonic expression of the Xenopus winged helix factors XFD-13/13''., Mech Dev 1999          
Most Recent DLG5 variants are associated with multiple congenital anomalies including ciliopathy phenotypes., J Med Genet 2020                        
All View All Papers 7 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 6 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 25 terms 11 terms 11 terms
PANTHER foxf1
KEGG Pathways K09399 K09399 K09399
KOG [K] Transcription factor of the Forkhead/HNF3 family
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks foxf1
Morpholinos (on-target & off-target) foxf1 MO1 foxf1 MO1 , foxf1 MO2
ORFs foxf1 ORF1 foxf1.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info