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Summary Expression Gene Literature (1) GO Terms (12) Nucleotides (73) Proteins (34) Interactants (133) Wiki
XB-GENEPAGE-487535
Gene Symbol:
nphp4.2

Gene Name:
nephronophthisis 4, gene 2

Synonyms:
nephrocystin-4 , slsn4 , nephronophthisis 4 , poc10 ( Add synonyms , Nomenclature history )

Gene Function:


Protein Function :



Interactants:
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Diseases: 


Disease Ontology:
Senior-Loken syndrome [+]

OMIM:
NEPHRONOPHTHISIS 4; NPHP4 [+]

External Links:
 
Xenbase Gene ID XB-GENE-487536 XB-GENE-6487300 XB-GENE-17343780
Gene Symbol nphp4.2 nphp4.2.L nphp4.2.S
Chromosome Chr7 chr7L
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 100101721
108696600
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine nphp4.2 nphp4.2.L nphp4.2.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC, AGR, Monarch, OMIM, GeneCards NPHP4 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Nphp4 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Nphp4 Ensembl
zebrafish
ZFIN, AGR nphp4 ZFIN Ensembl
chicken
GEISHA NPHP4 Ensembl
fruit fly
Publications
First The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery., Nat Genet 2016                                
Most Recent
All View All Papers 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 12 terms 3 terms 0 term
PANTHER nphp4.2
KEGG Pathways K16478
KOG
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks nphp4.2
Morpholinos nphp4.2 MO1 nphp4.2 MO1 , nphp4.2 MO2
Clones Horizon Source BioScience Horizon
Plasmids Addgene Addgene

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