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Summary Expression Phenotypes Gene Literature (0) GO Terms (26) Nucleotides (154) Proteins (51) Interactants (40) Wiki
XB-GENEPAGE-922035

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trappc4 - All

RefSeq mRNAs(4)
Models - Gene (30)
Models - mRNA (34)
mRNAs (9)
ESTs (56)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001142905 NM_001142905.2 trafficking protein particle complex subunit 4 992 bp NP_001136377 X. tropicalis
XM_018095427 XM_018095427.2 trafficking protein particle complex subunit 4 isoform X1 1108 bp XP_017950916 X. tropicalis
NM_001096643 NM_001096643.1 trafficking protein particle complex subunit 4 S homeolog 1024 bp NP_001090112 X. laevis.S
XM_018241997 XM_018241997.1 trafficking protein particle complex subunit 4 S homeolog isoform X1 669 bp XP_018097486 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g33315 X. laevis.S
NCBI 10.0 XBXT10g001761 X. tropicalis
ENSEMBL 10.0 ENSXETG00000010072 X. tropicalis
Xenbase 9.2 gene16929 X. laevis.S
JGI 9.1 Xelaev18004405m.g X. laevis.S
Xenbase 9.1 gene139 X. tropicalis
ENSEMBL 9.1 ENSXETG00000010072 X. tropicalis
JGI 8.0 Xetrov14030609m.g X. tropicalis
JGI 7.2 Xelaev16035069m.g X. laevis.S
JGI 7.1 Xetro.G01259 X. tropicalis
JGI 6.0 XeXenL6RMv10046545m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010072 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_390003 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_390003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_39000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_39000003 X. tropicalis
JGI 4.1 e_gw1.39.15.1 X. tropicalis
JGI 4.1 e_gw1.39.164.1 X. tropicalis
JGI 4.1 e_gw1.39.262.1 X. tropicalis
JGI 4.1 gw1.39.15.1 X. tropicalis
JGI 4.1 gw1.39.164.1 X. tropicalis
JGI 4.1 gw1.39.262.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_390007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390162 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390259 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390006 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA62860 X. laevis.S
NCBI 10.0 mRNA008887 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022197 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090664 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080406 X. tropicalis
Xenbase 9.2 rna49465 X. laevis.S
ENSEMBL 9.1 ENSXETT00000080406 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090664 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022197 X. tropicalis
Xenbase 9.1 rna408 X. tropicalis
JGI 9.1 Xelaev18004405m X. laevis.S
JGI 8.0 Xetrov14030609m X. tropicalis
JGI 7.2 Xelaev16035069m X. laevis.S
JGI 7.1 Xetro.G01259.1 X. tropicalis
JGI 6.0 XeXenL6RMv10046545m X. laevis.S
JGI 4.1 fgenesh1_pm.C_scaffold_39000003 X. tropicalis
JGI 4.1 gw1.39.15.1 X. tropicalis
JGI 4.1 gw1.39.164.1 X. tropicalis
JGI 4.1 gw1.39.262.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390259 X. tropicalis
JGI 4.1 e_gw1.39.164.1 X. tropicalis
JGI 4.1 e_gw1.39.262.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022197 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_390003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_390007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_390003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_390007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_390162 X. tropicalis
JGI 4.1 e_gw1.39.15.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_39000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_39000007 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7801295 BC121584 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:9017596 BC152700 X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8898169 BC166938 X. tropicalis
THdA043g03 CU075488 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
NM_001142905 X. tropicalis
XM_018095427 X. tropicalis
IMAGE:7391662 BC106500 X. laevis.S
NM_001096643 X. laevis.S
XM_018241997 X. laevis.S

ESTs (56)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA052c20 CR586965 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA043g03 CR575581 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA016h16 CR428967 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu007i17 AL635294 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8929499 EL678378 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8930740 EL664743 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7801295 DR834359 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
CAAO4864 CX936330 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7673367 CX882851 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs34H03 CN091127 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs21E04 CN082567 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:9017596 EL866018 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st25p02 DC170494 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8922352 EL837159 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7577272 CX422892 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8855544 EL818476 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7522666 CX471994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs15E04 CN078658 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT5308 CX414323 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr26C10 CN104655 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:9017596 EL866019 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst25p02 DC140331 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7577272 CX422891 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522666 CX471993 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA016h16 CR428968 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA043g03 CR575582 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr26C10 CN104654 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XZT5308 DR890124 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs15E04 CN078657 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs17A10 CN079929 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs21E04 CN082566 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs34H03 CN091126 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO4864 CX936329 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7801295 DR834358 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8930740 EL664742 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8923541 EL666998 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8929499 EL678377 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8922352 EL837160 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
PBX0096D12 AW640558 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0107C04 AW641512 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL196n11 BJ621308 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189g12 BJ619486 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl233b05 DC103576 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4783955 BM262396 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc003j19 AW200079 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
xlk74m03ex DC059255 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0132H02 AW643786 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL422o17ex BP676778 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998I1210648 BX844167 5' X. laevis.S Soares NXEG egg unfertilized egg stage
rxlk74m03ex DC025822 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl234b05 DC069721 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL422o17ex BP714008 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl233b05 DC069440 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XENOPUS_SOURCE_ID:xlnoc003j19 AW199078 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL196n11 BJ638020 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4783955 BM262085 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage