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Summary Expression Phenotypes Gene Literature (23) GO Terms (15) Nucleotides (218) Proteins (128) Interactants (288) Wiki
XB-GENEPAGE-962542

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ebf3 - All

RefSeq mRNAs(40)
Models - Gene (29)
Models - mRNA (42)
mRNAs (46)
ESTs (21)

RefSeq mRNAs (40)

Accession Version Protein Name Length Protein Species
XM_002932648 XM_002932648.5 transcription factor COE3 isoform X15 4396 bp XP_002932694 X. tropicalis
XM_002932649 XM_002932649.5 transcription factor COE3 isoform X17 4423 bp XP_002932695 X. tropicalis
XM_004915812 XM_004915812.4 transcription factor COE3 isoform X1 4689 bp XP_004915869 X. tropicalis
XM_004915816 XM_004915816.4 transcription factor COE3 isoform X6 4503 bp XP_004915873 X. tropicalis
XM_004915817 XM_004915817.4 transcription factor COE3 isoform X8 4628 bp XP_004915874 X. tropicalis
XM_004915818 XM_004915818.4 transcription factor COE3 isoform X8 4570 bp XP_004915875 X. tropicalis
XM_004915819 XM_004915819.4 transcription factor COE3 isoform X9 4561 bp XP_004915876 X. tropicalis
XM_004915820 XM_004915820.4 transcription factor COE3 isoform X10 4557 bp XP_004915877 X. tropicalis
XM_004915822 XM_004915822.4 transcription factor COE3 isoform X12 4530 bp XP_004915879 X. tropicalis
XM_004915824 XM_004915824.4 transcription factor COE3 isoform X13 4453 bp XP_004915881 X. tropicalis
XM_004915825 XM_004915825.4 transcription factor COE3 isoform X16 4427 bp XP_004915882 X. tropicalis
XM_018095891 XM_018095891.2 transcription factor COE3 isoform X18 4534 bp XP_017951380 X. tropicalis
XM_031905714 XM_031905714.1 XP_031761574.1 transcription factor COE3 isoform X2 4685 bp XP_031761574 X. tropicalis
XM_031905715 XM_031905715.1 XP_031761575.1 transcription factor COE3 isoform X3 4663 bp XP_031761575 X. tropicalis
XM_031905716 XM_031905716.1 XP_031761576.1 transcription factor COE3 isoform X4 4659 bp XP_031761576 X. tropicalis
XM_031905717 XM_031905717.1 XP_031761577.1 transcription factor COE3 isoform X5 4582 bp XP_031761577 X. tropicalis
XM_031905718 XM_031905718.1 XP_031761578.1 transcription factor COE3 isoform X7 4578 bp XP_031761578 X. tropicalis
XM_031905720 XM_031905720.1 XP_031761580.1 transcription factor COE3 isoform X11 4552 bp XP_031761580 X. tropicalis
XM_031905721 XM_031905721.1 XP_031761581.1 transcription factor COE3 isoform X14 4450 bp XP_031761581 X. tropicalis
NM_001090332 NM_001090332.1 transcription factor COE3 2721 bp NP_001083801 X. laevis.L
XM_018227378 XM_018227378.2 transcription factor COE3-like isoform X2 3739 bp XP_018082867 X. laevis.S
XM_018227381 XM_018227381.2 transcription factor COE3-like isoform X4 3712 bp XP_018082870 X. laevis.S
XM_018227384 XM_018227384.2 transcription factor COE3-like isoform X5 3636 bp XP_018082873 X. laevis.S
XM_018227385 XM_018227385.2 transcription factor COE3-like isoform X7 3615 bp XP_018082874 X. laevis.S
XM_018227386 XM_018227386.2 transcription factor COE3-like isoform X8 2618 bp XP_018082875 X. laevis.S
XM_018227387 XM_018227387.2 transcription factor COE3-like isoform X8 3683 bp XP_018082876 X. laevis.S
XM_018227388 XM_018227388.2 transcription factor COE3-like isoform X10 3674 bp XP_018082877 X. laevis.S
XM_018227389 XM_018227389.2 transcription factor COE3 isoform X11 3670 bp XP_018082878 X. laevis.S
XM_018227392 XM_018227392.2 transcription factor COE3-like isoform X12 3643 bp XP_018082881 X. laevis.S
XM_018227395 XM_018227395.2 transcription factor COE3-like isoform X14 3567 bp XP_018082884 X. laevis.S
XM_018227396 XM_018227396.2 transcription factor COE3-like isoform X16 3536 bp XP_018082885 X. laevis.S
XM_041570895 XM_041570895.1 XP_041426829.1 transcription factor COE3-like isoform X1 3743 bp XP_041426829 X. laevis.S
XM_041570896 XM_041570896.1 XP_041426830.1 transcription factor COE3-like isoform X3 3801 bp XP_041426830 X. laevis.S
XM_041570897 XM_041570897.1 XP_041426831.1 transcription factor COE3-like isoform X6 3633 bp XP_041426831 X. laevis.S
XM_041570898 XM_041570898.1 XP_041426832.1 transcription factor COE3-like isoform X9 3606 bp XP_041426832 X. laevis.S
XM_041570901 XM_041570901.1 XP_041426835.1 transcription factor COE3-like isoform X8 2619 bp XP_041426835 X. laevis.S
XM_041570902 XM_041570902.1 XP_041426836.1 transcription factor COE3-like isoform X13 2511 bp XP_041426836 X. laevis.S
XM_041570903 XM_041570903.1 XP_041426837.1 transcription factor COE3 isoform X15 3564 bp XP_041426837 X. laevis.S
XM_041570904 XM_041570904.1 XP_041426838.1 transcription factor COE3-like isoform X17 3419 bp XP_041426838 X. laevis.S
XM_041570905 XM_041570905.1 XP_041426839.1 transcription factor COE3-like isoform X18 3477 bp XP_041426839 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g32576 X. laevis.S
NCBI 10.1 XBXL10_1g30297 X. laevis.L
NCBI 10.0 XBXT10g013717 X. tropicalis
ENSEMBL 10.0 ENSXETG00000011309 X. tropicalis
Xenbase 9.2 gene7801 X. laevis.L
Xenbase 9.2 gene19352 X. laevis.S
JGI 9.1 Xelaev18036865m.g X. laevis.S
JGI 9.1 Xelaev18034571m.g X. laevis.L
Xenbase 9.1 gene4587 X. tropicalis
ENSEMBL 9.1 ENSXETG00000011309 X. tropicalis
JGI 7.2 Xelaev16072460m.g X. laevis.L
JGI 7.1 Xetro.G00370 X. tropicalis
JGI 6.0 XeXenL6RMv10009874m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011309 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_32000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000024 X. tropicalis
JGI 4.1 e_gw1.32.106.1 X. tropicalis
JGI 4.1 e_gw1.32.11.1 X. tropicalis
JGI 4.1 e_gw1.32.27.1 X. tropicalis
JGI 4.1 e_gw1.32.6.1 X. tropicalis
JGI 4.1 e_gw1.32.89.1 X. tropicalis
JGI 4.1 gw1.32.106.1 X. tropicalis
JGI 4.1 gw1.32.11.1 X. tropicalis
JGI 4.1 gw1.32.27.1 X. tropicalis
JGI 4.1 gw1.32.6.1 X. tropicalis
JGI 4.1 gw1.32.89.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000023 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_32000002 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA57042 X. laevis.L
NCBI 10.1 XBmRNA61459 X. laevis.S
ENSEMBL 10.0 ENSXETT00000024690 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067029 X. tropicalis
NCBI 10.0 mRNA067815 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103657 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083466 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027874 X. tropicalis
Xenbase 9.2 rna56536 X. laevis.S
Xenbase 9.2 rna22768 X. laevis.L
ENSEMBL 9.1 ENSXETT00000074875 X. tropicalis
JGI 9.1 Xelaev18034571m X. laevis.L
ENSEMBL 9.1 ENSXETT00000024690 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077833 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027874 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067029 X. tropicalis
JGI 9.1 Xelaev18036865m X. laevis.S
ENSEMBL 9.1 ENSXETT00000083466 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087816 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093021 X. tropicalis
Xenbase 9.1 rna14926 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103657 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082140 X. tropicalis
JGI 7.2 Xelaev16072460m X. laevis.L
JGI 7.1 Xetro.G00370.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009874m X. laevis.L
JGI 4.1 gw1.32.106.1 X. tropicalis
JGI 4.1 e_gw1.32.11.1 X. tropicalis
JGI 4.1 e_gw1.32.27.1 X. tropicalis
JGI 4.1 e_gw1.32.6.1 X. tropicalis
JGI 4.1 e_gw1.32.89.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024690 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_32000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_32000004 X. tropicalis
JGI 4.1 fgenesh_pm_kg.C_scaffold_32000002 X. tropicalis
JGI 4.1 e_gw1.32.106.1 X. tropicalis
JGI 4.1 gw1.32.11.1 X. tropicalis
JGI 4.1 gw1.32.27.1 X. tropicalis
JGI 4.1 gw1.32.6.1 X. tropicalis
JGI 4.1 gw1.32.89.1 X. tropicalis

mRNAs from cDNA libraries (46)

Clone Accession Species Library Anatomy Stage
IMAGE:7604756 BC157373 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu112b17 CT030628 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002932648 X. tropicalis
XM_002932649 X. tropicalis
XM_004915812 X. tropicalis
XM_004915816 X. tropicalis
XM_004915817 X. tropicalis
XM_004915818 X. tropicalis
XM_004915819 X. tropicalis
XM_004915820 X. tropicalis
XM_004915822 X. tropicalis
XM_004915824 X. tropicalis
XM_004915825 X. tropicalis
XM_018095891 X. tropicalis
XM_031905714 X. tropicalis
XM_031905715 X. tropicalis
XM_031905716 X. tropicalis
XM_031905717 X. tropicalis
XM_031905718 X. tropicalis
XM_031905720 X. tropicalis
XM_031905721 X. tropicalis
AF040994 AF040994 X. laevis.L
IMAGE:9093642 BC170260 X. laevis.L
KX011534 X. laevis.L
KX011535 X. laevis.L
NM_001090332 X. laevis.L
XM_018227378 X. laevis.S
XM_018227381 X. laevis.S
XM_018227384 X. laevis.S
XM_018227385 X. laevis.S
XM_018227386 X. laevis.S
XM_018227387 X. laevis.S
XM_018227388 X. laevis.S
XM_018227389 X. laevis.S
XM_018227392 X. laevis.S
XM_018227395 X. laevis.S
XM_018227396 X. laevis.S
XM_041570895 X. laevis.S
XM_041570896 X. laevis.S
XM_041570897 X. laevis.S
XM_041570898 X. laevis.S
XM_041570901 X. laevis.S
XM_041570902 X. laevis.S
XM_041570903 X. laevis.S
XM_041570904 X. laevis.S
XM_041570905 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu112b17 AL797568 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA042j04 CR440900 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA009a07 CR564701 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA012i23 CR566218 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA071n21 BX727998 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7596627 CX337126 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621631 CX342144 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608305 CX409096 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604756 CX412056 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs21P01 CN082797 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7596627 CX337125 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621631 CX342143 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu112b17 BX691412 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs21P01 CN082796 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA042j04 CR440901 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7608305 CX409095 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA009a07 CR564702 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA012i23 CR566219 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7604756 CX412055 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL068h14 BJ062594 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068h14 BJ080607 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25