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Summary Expression Phenotypes Gene Literature (0) GO Terms (33) Nucleotides (268) Proteins (100) Interactants (220) Wiki
XB-GENEPAGE-986384

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sec16a - All

RefSeq mRNAs(16)
Models - Gene (39)
Models - mRNA (59)
mRNAs (22)
ESTs (71)

RefSeq mRNAs (16)

Accession Version Protein Name Length Protein Species
XM_002935232 XM_002935232.5 protein transport protein Sec16A isoform X2 7601 bp XP_002935278 X. tropicalis
XM_004916638 XM_004916638.4 protein transport protein Sec16A isoform X1 10231 bp XP_004916695 X. tropicalis
XM_031891406 XM_031891406.1 XP_031747266.1 protein transport protein Sec16A isoform X3 7541 bp XP_031747266 X. tropicalis
XM_031891407 XM_031891407.1 XP_031747267.1 protein transport protein Sec16A isoform X4 7511 bp XP_031747267 X. tropicalis
XM_018229231 XM_018229231.2 protein transport protein Sec16A isoform X1 7932 bp XP_018084720 X. laevis.L
XM_018229232 XM_018229232.2 protein transport protein Sec16A isoform X1 7917 bp XP_018084721 X. laevis.L
XM_018229233 XM_018229233.2 protein transport protein Sec16A isoform X2 7929 bp XP_018084722 X. laevis.L
XM_018229234 XM_018229234.2 protein transport protein Sec16A isoform X3 7872 bp XP_018084723 X. laevis.L
XM_018229235 XM_018229235.2 protein transport protein Sec16A isoform X4 7869 bp XP_018084724 X. laevis.L
XM_018229236 XM_018229236.2 protein transport protein Sec16A isoform X5 7842 bp XP_018084725 X. laevis.L
XM_018229238 XM_018229238.2 protein transport protein Sec16A isoform X6 7779 bp XP_018084727 X. laevis.L
XM_041572347 XM_041572347.1 XP_041428281.1 protein transport protein Sec16A isoform X1 7917 bp XP_041428281 X. laevis.L
XM_041572348 XM_041572348.1 XP_041428282.1 protein transport protein Sec16A isoform X1 7914 bp XP_041428282 X. laevis.L
XM_018232579 XM_018232579.2 protein transport protein Sec16A isoform X1 7873 bp XP_018088068 X. laevis.S
XM_018232581 XM_018232581.2 protein transport protein Sec16A isoform X2 7813 bp XP_018088070 X. laevis.S
XM_018232582 XM_018232582.2 protein transport protein Sec16A isoform X3 7783 bp XP_018088071 X. laevis.S

Models - Gene (39)

Source Version Model Species
NCBI 10.1 XBXL10_1g34303 X. laevis.L
NCBI 10.1 XBXL10_1g37547 X. laevis.S
NCBI 10.0 XBXT10g005691 X. tropicalis
ENSEMBL 10.0 ENSXETG00000031864 X. tropicalis
Xenbase 9.2 gene15905 X. laevis.S
Xenbase 9.2 gene849 X. laevis.L
JGI 9.1 Xelaev18038315m.g X. laevis.L
JGI 9.1 Xelaev18041534m.g X. laevis.S
Xenbase 9.1 gene30472 X. tropicalis
ENSEMBL 9.1 ENSXETG00000031864 X. tropicalis
JGI 8.0 Xetrov14008479m.g X. tropicalis
JGI 7.2 Xelaev16048910m.g X. laevis.L
JGI 7.1 Xetro.H00046 X. tropicalis
JGI 6.0 XeXenL6RMv10039968m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000753 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370140 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370336 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370134 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370001 X. tropicalis
JGI 4.1 e_gw1.137.336.1 X. tropicalis
JGI 4.1 e_gw1.137.140.1 X. tropicalis
JGI 4.1 e_gw1.137.135.1 X. tropicalis
JGI 4.1 e_gw1.137.134.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370046 X. tropicalis
JGI 4.1 gw1.137.336.1 X. tropicalis
JGI 4.1 gw1.137.140.1 X. tropicalis
JGI 4.1 gw1.137.135.1 X. tropicalis
JGI 4.1 gw1.137.134.1 X. tropicalis
JGI 4.1 gw1.137.1.1 X. tropicalis
JGI 4.1 e_gw1.137.1.1 X. tropicalis

mRNAs based on gene models(59)

Source Version Model Species
NCBI 10.1 XBmRNA70887 X. laevis.S
NCBI 10.1 XBmRNA64716 X. laevis.L
NCBI 10.0 mRNA028233 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104998 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063181 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107608 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091593 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068503 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080921 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121396 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098467 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090820 X. tropicalis
Xenbase 9.2 rna2494 X. laevis.L
Xenbase 9.2 rna46486 X. laevis.S
ENSEMBL 9.1 ENSXETT00000063181 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068503 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080921 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090820 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091593 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098467 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104998 X. tropicalis
Xenbase 9.1 rna58327 X. tropicalis
JGI 9.1 Xelaev18038315m X. laevis.L
JGI 9.1 Xelaev18041534m X. laevis.S
JGI 8.0 Xetrov14008479m X. tropicalis
JGI 7.2 Xelaev16048910m X. laevis.L
JGI 7.1 Xetro.H00046.2 X. tropicalis
JGI 7.1 Xetro.H00046.3 X. tropicalis
JGI 7.1 Xetro.H00046.6 X. tropicalis
JGI 7.1 Xetro.H00046.1 X. tropicalis
JGI 7.1 Xetro.H00046.7 X. tropicalis
JGI 7.1 Xetro.H00046.4 X. tropicalis
JGI 7.1 Xetro.H00046.5 X. tropicalis
JGI 6.0 XeXenL6RMv10039968m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_137000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000012 X. tropicalis
JGI 4.1 gw1.137.1.1 X. tropicalis
JGI 4.1 gw1.137.134.1 X. tropicalis
JGI 4.1 gw1.137.135.1 X. tropicalis
JGI 4.1 gw1.137.140.1 X. tropicalis
JGI 4.1 gw1.137.336.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001666 X. tropicalis
JGI 4.1 e_gw1.137.135.1 X. tropicalis
JGI 4.1 e_gw1.137.336.1 X. tropicalis
JGI 4.1 e_gw1.137.140.1 X. tropicalis
JGI 4.1 e_gw1.137.134.1 X. tropicalis
JGI 4.1 e_gw1.137.1.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370043 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370012 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370134 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370140 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370336 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000042 X. tropicalis

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
IMAGE:7681019 BC168630 X. tropicalis
IMAGE:7681612 BC168631 X. tropicalis
XM_002935232 X. tropicalis
XM_004916638 X. tropicalis
XM_031891406 X. tropicalis
XM_031891407 X. tropicalis
IMAGE:5085030 BC108300 X. laevis.L
NM_001096350 X. laevis.L
XM_018229231 X. laevis.L
XM_018229232 X. laevis.L
XM_018229233 X. laevis.L
XM_018229234 X. laevis.L
XM_018229235 X. laevis.L
XM_018229236 X. laevis.L
XM_018229238 X. laevis.L
XM_041572347 X. laevis.L
XM_041572348 X. laevis.L
IMAGE:6861208 BC130201 X. laevis.S
XM_018232579 X. laevis.S
XM_018232581 X. laevis.S
XM_018232582 X. laevis.S
XR_001932889 X. laevis.S

ESTs (71)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7646274 CX804135 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7635607 CX339322 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7650415 CX811053 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7574722 CX441986 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525324 CX442641 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr16O20 CN099631 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu061g09 AL673826 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5309029 BQ391471 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7646595 CX804376 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas025o19 AL627618 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9019609 EL868780 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8916059 EL828811 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854743 EL816902 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7698090 CX930059 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7687651 CX909880 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7651402 CX812907 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:6976552 CF242304 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
st18a08 DC167994 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st26f06 DC170601 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32c10 DC172565 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st8e23 DC175396 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st52m14 DC179680 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st53m14 DC179915 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st57e07 DC180752 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst57e07 DC150483 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst18a08 DC137893 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst26f06 DC140440 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst32c10 DC142288 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst8e23 DC145069 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst52m14 DC149388 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst53m14 DC149633 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7574722 CX441985 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5309029 BQ391470 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu061g09 BX684603 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr16O20 CN099630 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7635607 CX339321 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646274 CX804134 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646595 CX804375 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650415 CX811052 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651402 CX812906 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7687651 CX909879 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698090 CX930058 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8916059 EL828812 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9015811 EL862566 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9019609 EL868781 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:3437958 BF613538 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XL141m24 BJ093231 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk154h09ex DC062366 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk63n01ex DC055443 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7975229 DR726807 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
PBX0123C06 AW642934 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL488k16ex BP699767 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL077p05 BJ063970 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3437948 BG019467 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XL088c23 BJ066779 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098d20 BJ072317 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098i11 BJ072414 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108a10 BJ072808 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL215b17 BJ626504 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197a21 BJ621352 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164i14 BJ613612 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197a21 BJ638063 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL108a10 BJ089771 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL164i14 BJ630225 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL098d20 BJ089344 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7975229 DR726869 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL077p05 BJ082094 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098i11 BJ089436 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088c23 BJ084113 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL488k16ex BP732639 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL141m24 BJ097453 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5