Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (7) GO Terms (12) Nucleotides (150) Proteins (50) Interactants (333) Wiki
XB-GENEPAGE-1003336

Show:     All X. tropicalis X. laevis

Nucleotide sequences for fndc3a - All

RefSeq mRNAs(15)
Models - Gene (25)
Models - mRNA (25)
mRNAs (16)
ESTs (36)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
XM_031891883 XM_031891883.1 XP_031747743.1 fibronectin type-III domain-containing protein 3A isoform X1 8289 bp XP_031747743 X. tropicalis
XM_031891884 XM_031891884.1 XP_031747744.1 fibronectin type-III domain-containing protein 3A isoform X2 8274 bp XP_031747744 X. tropicalis
XM_018247598 XM_018247598.2 fibronectin type-III domain-containing protein 3a isoform X1 6629 bp XP_018103087 X. laevis.L
XM_018247599 XM_018247599.2 fibronectin type-III domain-containing protein 3a isoform X1 6536 bp XP_018103088 X. laevis.L
XM_041582601 XM_041582601.1 XP_041438535.1 fibronectin type-III domain-containing protein 3a isoform X1 6230 bp XP_041438535 X. laevis.L
XM_041582602 XM_041582602.1 XP_041438536.1 fibronectin type-III domain-containing protein 3a isoform X2 6536 bp XP_041438536 X. laevis.L
XM_041582603 XM_041582603.1 XP_041438537.1 fibronectin type-III domain-containing protein 3a isoform X3 5873 bp XP_041438537 X. laevis.L
XM_041582604 XM_041582604.1 XP_041438538.1 fibronectin type-III domain-containing protein 3a isoform X4 3869 bp XP_041438538 X. laevis.L
XM_018250176 XM_018250176.2 fibronectin type-III domain-containing protein 3a isoform X1 5800 bp XP_018105665 X. laevis.S
XM_018250177 XM_018250177.2 fibronectin type-III domain-containing protein 3a isoform X1 6024 bp XP_018105666 X. laevis.S
XM_018250178 XM_018250178.2 fibronectin type-III domain-containing protein 3a isoform X1 5893 bp XP_018105667 X. laevis.S
XM_018250179 XM_018250179.2 fibronectin type-III domain-containing protein 3a isoform X1 5931 bp XP_018105668 X. laevis.S
XM_018250180 XM_018250180.2 fibronectin type-III domain-containing protein 3a isoform X3 5291 bp XP_018105669 X. laevis.S
XM_041584476 XM_041584476.1 XP_041440410.1 fibronectin type-III domain-containing protein 3a isoform X1 5599 bp XP_041440410 X. laevis.S
XM_041584477 XM_041584477.1 XP_041440411.1 fibronectin type-III domain-containing protein 3a isoform X2 5406 bp XP_041440411 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g8312 X. laevis.L
NCBI 10.1 XBXL10_1g10897 X. laevis.S
NCBI 10.0 XBXT10g006561 X. tropicalis
Xenbase 9.2 gene16120 X. laevis.L
Xenbase 9.2 gene7786 X. laevis.S
JGI 9.1 Xelaev18013646m.g X. laevis.L
JGI 9.1 Xelaev18016100m.g X. laevis.S
Xenbase 9.1 gene20007 X. tropicalis
JGI 7.1 Xetro.B01575 X. tropicalis
JGI 6.0 XeXenL6RMv10015057m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013335 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670224 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1670017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_167000048 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_167000018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670056 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1670032 X. tropicalis
JGI 4.1 gw1.167.57.1 X. tropicalis
JGI 4.1 gw1.167.56.1 X. tropicalis
JGI 4.1 gw1.167.225.1 X. tropicalis
JGI 4.1 e_gw1.167.57.1 X. tropicalis
JGI 4.1 e_gw1.167.56.1 X. tropicalis
JGI 4.1 e_gw1.167.225.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1670047 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA20484 X. laevis.S
NCBI 10.1 XBmRNA15697 X. laevis.L
NCBI 10.0 mRNA032450 X. tropicalis
Xenbase 9.2 rna22725 X. laevis.S
Xenbase 9.2 rna47129 X. laevis.L
Xenbase 9.1 rna41553 X. tropicalis
JGI 9.1 Xelaev18016100m X. laevis.S
JGI 9.1 Xelaev18013646m X. laevis.L
JGI 7.1 Xetro.B01575.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015057m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1670224 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1670056 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1670032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1670017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1670047 X. tropicalis
JGI 4.1 e_gw1.167.57.1 X. tropicalis
JGI 4.1 e_gw1.167.56.1 X. tropicalis
JGI 4.1 e_gw1.167.225.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029237 X. tropicalis
JGI 4.1 gw1.167.57.1 X. tropicalis
JGI 4.1 gw1.167.56.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_167000018 X. tropicalis
JGI 4.1 gw1.167.225.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_167000048 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
TGas120f24 CT025433 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_031891883 X. tropicalis
XM_031891884 X. tropicalis
XM_018247598 X. laevis.L
XM_018247599 X. laevis.L
XM_041582601 X. laevis.L
XM_041582602 X. laevis.L
XM_041582603 X. laevis.L
XM_041582604 X. laevis.L
XM_018250176 X. laevis.S
XM_018250177 X. laevis.S
XM_018250178 X. laevis.S
XM_018250179 X. laevis.S
XM_018250180 X. laevis.S
XM_041584476 X. laevis.S
XM_041584477 X. laevis.S

ESTs (36)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7657009 CX828453 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7713267 CX970893 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7803587 DR838314 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
CABC9237 DR840273 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TGas098p09 BX755607 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577793 CX423836 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572096 CX513964 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8951873 EL653966 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
TGas062k09 AL683147 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA017g19 CR420298 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA022j21 CR438024 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas109n09 AL956747 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7605045 CX412365 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7641884 CX796450 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8859620 EL824252 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7803587 DR838313 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7713267 CX970892 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
CABC9237 DR840272 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7657009 CX828452 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas062k09 BX746412 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7605045 DR893737 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas098p09 BX755608 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128a03 BX763202 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577793 CX423835 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA017g19 CR420299 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7572096 CX513963 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7641884 CX796449 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
XL092g10 BJ070950 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6633093 BU907813 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL215j09 BJ626662 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL448j07ex BP685249 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3399126 BE576210 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:5536580 CF288566 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4783477 BI349473 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783477 BM191786 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL448j07ex BP721136 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5