Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (172) Proteins (43) Interactants (15) Wiki
XB-GENEPAGE-1004911

Show:     All X. tropicalis X. laevis

Nucleotide sequences for c1orf50 - All

RefSeq mRNAs(3)
Models - Gene (27)
Models - mRNA (32)
mRNAs (8)
ESTs (68)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016665 NM_001016665.3 uncharacterized protein C1orf50 homolog 1218 bp NP_001016665 X. tropicalis
XM_012966617 XM_012966617.3 uncharacterized protein C1orf50 homolog isoform X1 1369 bp XP_012822071 X. tropicalis
NM_001095225 NM_001095225.1 uncharacterized protein C1orf50 homolog 868 bp NP_001088694 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g31304 X. laevis.L
NCBI 10.0 XBXT10g019604 X. tropicalis
ENSEMBL 10.0 c1orf50 X. tropicalis
Xenbase 9.2 gene19232 X. laevis.L
JGI 9.1 Xelaev18035687m.g X. laevis.L
Xenbase 9.1 gene7880 X. tropicalis
ENSEMBL 9.1 c1orf50 X. tropicalis
JGI 8.0 Xetrov14030159m.g X. tropicalis
JGI 7.2 Xelaev16002219m.g X. laevis.L
JGI 7.1 Xetro.G01522 X. tropicalis
JGI 6.0 XeXenL6RMv10001835m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570143 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2570010 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_257000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570120 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570099 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570032 X. tropicalis
JGI 4.1 gw1.257.99.1 X. tropicalis
JGI 4.1 gw1.257.143.1 X. tropicalis
JGI 4.1 gw1.257.120.1 X. tropicalis
JGI 4.1 e_gw1.257.99.1 X. tropicalis
JGI 4.1 e_gw1.257.143.1 X. tropicalis
JGI 4.1 e_gw1.257.120.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570041 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA59213 X. laevis.L
ENSEMBL 10.0 ENSXETT00000085398 X. tropicalis
NCBI 10.0 mRNA096787 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092713 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014049 X. tropicalis
Xenbase 9.2 rna56193 X. laevis.L
Xenbase 9.1 rna25438 X. tropicalis
JGI 9.1 Xelaev18035687m X. laevis.L
ENSEMBL 9.1 ENSXETT00000092713 X. tropicalis
ENSEMBL 9.1 ENSXETT00000014049 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085398 X. tropicalis
JGI 8.0 Xetrov14030159m X. tropicalis
JGI 7.2 Xelaev16002219m X. laevis.L
JGI 7.1 Xetro.G01522.1 X. tropicalis
JGI 7.1 Xetro.G01522.2 X. tropicalis
JGI 6.0 XeXenL6RMv10001835m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_257000010 X. tropicalis
JGI 4.1 e_gw1.257.143.1 X. tropicalis
JGI 4.1 e_gw1.257.99.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014049 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2570010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570041 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570120 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570143 X. tropicalis
JGI 4.1 e_gw1.257.120.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000041 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_257000009 X. tropicalis
JGI 4.1 gw1.257.120.1 X. tropicalis
JGI 4.1 gw1.257.143.1 X. tropicalis
JGI 4.1 gw1.257.99.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7539502 BC158946 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9040460 BC171198 X. tropicalis
IMAGE:9040464 BC171202 X. tropicalis
TNeu056b04 CR760289 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001016665 X. tropicalis
XM_012966617 X. tropicalis
IMAGE:7203984 BC087331 X. laevis.L
NM_001095225 X. laevis.L

ESTs (68)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu083e04 AL785302 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056b04 AL679751 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048o08 AL659656 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7756117 DN058560 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7755253 DN057409 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753644 DN055373 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753463 DN054488 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7751313 DN050902 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7747725 DN043427 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TGas028o04 AL652383 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8912717 EL824301 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7539502 CX452603 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8923340 EL664777 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7553836 CX492121 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557653 CX506096 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7464375 CV807142 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7017407 CF524358 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
xtbs26D24 CN086170 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7619379 CX346720 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA071k09 CR432482 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA071p15 CR424986 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8912717 EL824302 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7539502 CX452602 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553836 CX492120 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu056b04 BX688806 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5335471 BQ520093 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA071p15 CR424987 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA050o08 CR445592 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7619379 CX346719 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs26D24 CN086169 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7747725 DN043426 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7751313 DN050901 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752462 DN053203 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753463 DN054487 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753644 DN055372 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7755253 DN057408 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7755907 DN058111 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7756117 DN058559 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8923340 EL664776 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGp998C168297 BX852775 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:3402881 BG364698 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0154G04 AW645686 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xlk136k21ex DC047415 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk136o17ex DC047492 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk139h14ex DC048316 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk6a11ex DC057424 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk159k18ex DC063976 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:2942521 AW595893 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
PBX0142E09 AW644649 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3399879 BG161979 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
PBX0127E07 AW643325 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL467l17ex BP692185 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7297371 CO383206 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
PBX0143C10 AW644714 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl325h06 DC130670 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3300833 BE131872 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl322m18 DC129841 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0063A05 AW637828 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL467l17ex BP726539 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk139h14ex DC015061 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk136o17ex DC014258 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk136k21ex DC014182 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk6a11ex DC024011 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk159k18ex DC030463 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:2942533 AW460642 3' X. laevis.L Xenla 13LiCl whole organism NF stage 13
IMAGE:7297371 CO383364 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
rxl325h06 DC094807 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl322m18 DC094034 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15