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Summary Expression Phenotypes Gene Literature (1) GO Terms (22) Nucleotides (141) Proteins (57) Interactants (10) Wiki
XB-GENEPAGE-1013397

Show:     All X. tropicalis X. laevis

Nucleotide sequences for galnt1 - All

RefSeq mRNAs(9)
Models - Gene (30)
Models - mRNA (40)
mRNAs (11)
ESTs (31)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001030376 NM_001030376.1 polypeptide N-acetylgalactosaminyltransferase 1 2408 bp NP_001025547 X. tropicalis
XM_031903409 XM_031903409.1 XP_031759269.1 polypeptide N-acetylgalactosaminyltransferase 1 isoform X1 5474 bp XP_031759269 X. tropicalis
NM_001089941 NM_001089941.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog 2735 bp NP_001083410 X. laevis.S
XM_041567101 XM_041567101.1 XP_041423035.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog isoform X1 5049 bp XP_041423035 X. laevis.S
XM_041567102 XM_041567102.1 XP_041423036.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog isoform X2 4291 bp XP_041423036 X. laevis.S
XM_041567103 XM_041567103.1 XP_041423037.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog isoform X2 4377 bp XP_041423037 X. laevis.S
XM_041567104 XM_041567104.1 XP_041423038.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog isoform X2 4417 bp XP_041423038 X. laevis.S
XM_041567105 XM_041567105.1 XP_041423039.1 polypeptide N-acetylgalactosaminyltransferase 1 S homeolog isoform X3 4298 bp XP_041423039 X. laevis.S
XM_041566219 XM_041566219.1 XP_041422153.1 polypeptide N-acetylgalactosaminyltransferase 1-like 1149 bp XP_041422153 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g29164 X. laevis.S
NCBI 10.1 XBXL10_1g27481 X. laevis.L
NCBI 10.0 XBXT10g012988 X. tropicalis
ENSEMBL 10.0 galnt1 X. tropicalis
Xenbase 9.2 gene42885 X. laevis.L
Xenbase 9.2 gene36027 X. laevis.S
Xenbase 9.1 gene29961 X. tropicalis
ENSEMBL 9.1 galnt1 X. tropicalis
JGI 8.0 Xetrov14027055m.g X. tropicalis
JGI 7.1 Xetro.K00860 X. tropicalis
JGI 6.0 XeXenL6RMv10035120m.g X. laevis.S
JGI 6.0 XeXenL6RMv10047887m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000014012 X. tropicalis
JGI 4.1 gw1.425.58.1 X. tropicalis
JGI 4.1 gw1.425.65.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_425000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_425000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_425000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_425000001 X. tropicalis
JGI 4.1 gw1.425.57.1 X. tropicalis
JGI 4.1 gw1.425.47.1 X. tropicalis
JGI 4.1 gw1.425.2.1 X. tropicalis
JGI 4.1 gw1.425.1.1 X. tropicalis
JGI 4.1 e_gw1.425.65.1 X. tropicalis
JGI 4.1 e_gw1.425.58.1 X. tropicalis
JGI 4.1 e_gw1.425.57.1 X. tropicalis
JGI 4.1 e_gw1.425.47.1 X. tropicalis
JGI 4.1 e_gw1.425.2.1 X. tropicalis
JGI 4.1 e_gw1.425.1.1 X. tropicalis
JGI 4.1 C_scaffold_425000002 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA54825 X. laevis.S
NCBI 10.1 XBmRNA51554 X. laevis.L
ENSEMBL 10.0 ENSXETT00000030607 X. tropicalis
NCBI 10.0 mRNA064246 X. tropicalis
ENSEMBL 10.0 ENSXETT00000030603 X. tropicalis
Xenbase 9.2 rna86001 X. laevis.L
Xenbase 9.2 rna76195 X. laevis.S
ENSEMBL 9.1 ENSXETT00000101892 X. tropicalis
ENSEMBL 9.1 ENSXETT00000030603 X. tropicalis
Xenbase 9.1 rna57480 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083643 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098452 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073409 X. tropicalis
ENSEMBL 9.1 ENSXETT00000030607 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080528 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091590 X. tropicalis
JGI 8.0 Xetrov14027055m X. tropicalis
JGI 7.1 Xetro.K00860.2 X. tropicalis
JGI 7.1 Xetro.K00860.1 X. tropicalis
JGI 6.0 XeXenL6RMv10047887m X. laevis.S
JGI 6.0 XeXenL6RMv10035120m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_425000002 X. tropicalis
JGI 4.1 e_gw1.425.1.1 X. tropicalis
JGI 4.1 e_gw1.425.2.1 X. tropicalis
JGI 4.1 e_gw1.425.47.1 X. tropicalis
JGI 4.1 e_gw1.425.57.1 X. tropicalis
JGI 4.1 e_gw1.425.58.1 X. tropicalis
JGI 4.1 e_gw1.425.65.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030603 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030607 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_425000001 X. tropicalis
JGI 4.1 C_scaffold_425000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_425000003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_425000001 X. tropicalis
JGI 4.1 gw1.425.1.1 X. tropicalis
JGI 4.1 gw1.425.2.1 X. tropicalis
JGI 4.1 gw1.425.47.1 X. tropicalis
JGI 4.1 gw1.425.57.1 X. tropicalis
JGI 4.1 gw1.425.58.1 X. tropicalis
JGI 4.1 gw1.425.65.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:5309419 BC090583 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001030376 X. tropicalis
XM_031903409 X. tropicalis
IMAGE:4032804 BC060419 X. laevis.S
NM_001089941 X. laevis.S
XM_041567101 X. laevis.S
XM_041567102 X. laevis.S
XM_041567103 X. laevis.S
XM_041567104 X. laevis.S
XM_041567105 X. laevis.S
XM_041566219 X. laevis.L

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6980997 CF148029 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5309419 BQ392165 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA046n17 CR585091 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA022k08 CR587320 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA016f23 BX714002 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034e24 BX745220 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7599983 CX344353 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584316 CX415351 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8868059 EL707266 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7016224 CF522957 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7640542 CX793727 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661287 CX842373 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7718683 CX981266 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8928680 EL677294 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8928680 EL677293 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTpA034e24 BX745221 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7599983 CX344352 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640542 CX793726 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7718683 CX981265 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA046n17 CR585092 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8868059 EL707265 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
THdA022k08 CR587321 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7661287 CX842372 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTpA016f23 BX714003 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7584316 CX415350 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
PBX0059G02 AW637547 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL144p08 BJ094266 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL450m07ex BP686266 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk80m20ex DC061532 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL144p08 BJ098199 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL450m07ex BP722060 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5