Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (8) Nucleotides (201) Proteins (70) Interactants (59) Wiki
XB-GENEPAGE-1013499

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ppp6r1 - All

RefSeq mRNAs(12)
Models - Gene (24)
Models - mRNA (42)
mRNAs (13)
ESTs (60)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_002939242 XM_002939242.5 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X3 3748 bp XP_002939288 X. tropicalis
XM_004916309 XM_004916309.3 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X4 3555 bp XP_004916366 X. tropicalis
XM_012967500 XM_012967500.3 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X1 3772 bp XP_012822954 X. tropicalis
XM_031906025 XM_031906025.1 XP_031761885.1 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X2 3167 bp XP_031761885 X. tropicalis
NM_001086547 NM_001086547.1 protein phosphatase 6 regulatory subunit 1 L homeolog 3044 bp NP_001080016 X. laevis.L
XM_018224291 XM_018224291.2 protein phosphatase 6 regulatory subunit 1 L homeolog isoform X2 3006 bp XP_018079780 X. laevis.L
XM_018224292 XM_018224292.2 protein phosphatase 6 regulatory subunit 1 L homeolog isoform X4 3688 bp XP_018079781 X. laevis.L
XM_041568370 XM_041568370.1 XP_041424304.1 protein phosphatase 6 regulatory subunit 1 L homeolog isoform X1 2903 bp XP_041424304 X. laevis.L
XM_041568371 XM_041568371.1 XP_041424305.1 protein phosphatase 6 regulatory subunit 1 L homeolog isoform X3 2879 bp XP_041424305 X. laevis.L
XM_018228234 XM_018228234.2 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X1 3859 bp XP_018083723 X. laevis.S
XM_018228235 XM_018228235.2 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X1 3876 bp XP_018083724 X. laevis.S
XM_018228236 XM_018228236.2 serine/threonine-protein phosphatase 6 regulatory subunit 1 isoform X2 3835 bp XP_018083725 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g31850 X. laevis.L
NCBI 10.1 XBXL10_1g33759 X. laevis.S
NCBI 10.0 XBXT10g015125 X. tropicalis
ENSEMBL 10.0 ppp6r1 X. tropicalis
Xenbase 9.2 gene4648 X. laevis.S
Xenbase 9.2 gene4445 X. laevis.L
JGI 9.1 Xelaev18037859m.g X. laevis.S
JGI 9.1 Xelaev18036138m.g X. laevis.L
Xenbase 9.1 gene3619 X. tropicalis
ENSEMBL 9.1 ppp6r1 X. tropicalis
JGI 8.0 Xetrov14031404m.g X. tropicalis
JGI 7.2 Xelaev16062579m.g X. laevis.L
JGI 7.1 Xetro.G01890 X. tropicalis
JGI 6.0 XeXenL6RMv10014559m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022927 X. tropicalis
JGI 4.1 e_gw1.460.66.1 X. tropicalis
JGI 4.1 e_gw1.460.52.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_460000012 X. tropicalis
JGI 4.1 C_scaffold_460000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_460000035 X. tropicalis
JGI 4.1 gw1.460.93.1 X. tropicalis
JGI 4.1 gw1.460.66.1 X. tropicalis
JGI 4.1 gw1.460.52.1 X. tropicalis
JGI 4.1 e_gw1.460.93.1 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA63759 X. laevis.S
NCBI 10.1 XBmRNA60109 X. laevis.L
ENSEMBL 10.0 ENSXETT00000085879 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072698 X. tropicalis
NCBI 10.0 mRNA074811 X. tropicalis
ENSEMBL 10.0 ENSXETT00000049587 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096955 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085776 X. tropicalis
Xenbase 9.2 rna13570 X. laevis.S
Xenbase 9.2 rna12968 X. laevis.L
ENSEMBL 9.1 ENSXETT00000094812 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095880 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096955 X. tropicalis
Xenbase 9.1 rna11912 X. tropicalis
JGI 9.1 Xelaev18037859m X. laevis.S
JGI 9.1 Xelaev18036138m X. laevis.L
ENSEMBL 9.1 ENSXETT00000049587 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067432 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072698 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072743 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085776 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085879 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093269 X. tropicalis
JGI 8.0 Xetrov14031404m X. tropicalis
JGI 7.2 Xelaev16062579m X. laevis.L
JGI 7.1 Xetro.G01890.1 X. tropicalis
JGI 7.1 Xetro.G01890.2 X. tropicalis
JGI 7.1 Xetro.G01890.3 X. tropicalis
JGI 7.1 Xetro.G01890.4 X. tropicalis
JGI 6.0 XeXenL6RMv10014559m X. laevis.L
ENSEMBL 4.1 ENSXETT00000049587 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049586 X. tropicalis
JGI 4.1 C_scaffold_460000013 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049584 X. tropicalis
JGI 4.1 e_gw1.460.93.1 X. tropicalis
JGI 4.1 e_gw1.460.66.1 X. tropicalis
JGI 4.1 gw1.460.66.1 X. tropicalis
JGI 4.1 e_gw1.460.52.1 X. tropicalis
JGI 4.1 gw1.460.93.1 X. tropicalis
JGI 4.1 gw1.460.52.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_460000035 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_460000012 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
XM_002939242 X. tropicalis
XM_004916309 X. tropicalis
XM_012967500 X. tropicalis
XM_031906025 X. tropicalis
IMAGE:4963553 BC059317 X. laevis.L
NM_001086547 X. laevis.L
XM_018224291 X. laevis.L
XM_018224292 X. laevis.L
XM_041568370 X. laevis.L
XM_041568371 X. laevis.L
XM_018228234 X. laevis.S
XM_018228235 X. laevis.S
XM_018228236 X. laevis.S

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7526418 CX443900 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7603071 CX394031 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8963528 EL656859 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7603594 CX395447 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7542631 CX449759 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7604524 CX411262 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st81j23 DC186893 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8092 CX942205 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7569458 CX453387 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7642859 CX797606 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TGas024i12 AL629678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7519035 CX478475 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7686591 CX907735 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas056n24 AL678235 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7687407 CX909145 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7519284 CX478867 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAN12017 CX928358 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8889544 EL848663 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
CAAO2320 CX932425 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7553390 CX491684 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO2469 CX932683 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7528246 CX425344 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567534 CX508535 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7718184 CX980433 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712886 CX970560 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TNeu135b24 AL798907 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6981181 CF147988 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA055e13 CR431885 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7786863 CX328684 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529966 CX427064 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7616326 CX393184 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8889544 EL848664 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst81j23 DC156803 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7528246 CX425343 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542631 CX449758 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569458 CX453386 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519035 CX478474 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519284 CX478866 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553390 CX491683 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567534 CX508534 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7616326 CX393183 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603071 CX394030 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603594 CX395446 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604524 CX411261 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786863 DR904516 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7642859 CX797605 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645510 CX802791 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7686591 CX907734 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687407 CX909144 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN12017 CX928357 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO2320 CX932424 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO2469 CX932682 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8092 CX942204 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7712886 CX970559 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718184 CX980432 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
XL405p17ex BP689927 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7299891 CO383332 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
xl232g05 DC103395 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8825020 EG584955 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6634194 BU908680 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10