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Summary Expression Phenotypes Gene Literature (4) GO Terms (1) Nucleotides (310) Proteins (91) Interactants (237) Wiki
XB-GENEPAGE-1015604

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rnf38 - All

Models - Gene (34)
Models - mRNA (47)
mRNAs (26)
ESTs (130)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g000577 X. tropicalis
NCBI 10.1 XBXL10_1g1820 X. laevis.L
NCBI 10.1 XBXL10_1g4610 X. laevis.S
ENSEMBL 10.0 rnf38 X. tropicalis
JGI 9.1 Xelaev18006546m.g X. laevis.L
JGI 9.1 Xelaev18001217m.g X. laevis.S
Xenbase 9.1 gene4300 X. tropicalis
Xenbase 9.2 gene10742 X. laevis.L
Xenbase 9.2 gene13432 X. laevis.S
ENSEMBL 9.1 rnf38 X. tropicalis
JGI 8.0 Xetrov14003136m.g X. tropicalis
JGI 7.1 Xetro.A01886 X. tropicalis
JGI 7.2 Xelaev16005976m.g X. laevis.L
JGI 6.0 XeXenL6RMv10010841m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006554 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_175000003 X. tropicalis
JGI 4.1 e_gw1.175.101.1 X. tropicalis
JGI 4.1 e_gw1.175.41.1 X. tropicalis
JGI 4.1 e_gw1.175.99.1 X. tropicalis
JGI 4.1 gw1.175.101.1 X. tropicalis
JGI 4.1 gw1.175.41.1 X. tropicalis
JGI 4.1 gw1.175.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1750016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750101 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1750010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1750039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1750040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1750009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_175000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_175000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_175000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_175000009 X. tropicalis

Models - mRNA (47)

Source Version Model Species
NCBI 10.0 mRNA002922 X. tropicalis
NCBI 10.1 XBmRNA3236 X. laevis.L
NCBI 10.1 XBmRNA8543 X. laevis.S
ENSEMBL 10.0 ENSXETT00000082373 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095876 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014343 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094410 X. tropicalis
JGI 9.1 Xelaev18006546m X. laevis.L
JGI 9.1 Xelaev18001217m X. laevis.S
Xenbase 9.1 rna14030 X. tropicalis
Xenbase 9.2 rna39087 X. laevis.S
Xenbase 9.2 rna31217 X. laevis.L
ENSEMBL 9.1 ENSXETT00000095876 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094907 X. tropicalis
ENSEMBL 9.1 ENSXETT00000014343 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082373 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094410 X. tropicalis
JGI 8.0 Xetrov14003136m X. tropicalis
JGI 7.1 Xetro.A01886.2 X. tropicalis
JGI 7.1 Xetro.A01886.7 X. tropicalis
JGI 7.1 Xetro.A01886.3 X. tropicalis
JGI 7.1 Xetro.A01886.4 X. tropicalis
JGI 7.1 Xetro.A01886.5 X. tropicalis
JGI 7.1 Xetro.A01886.6 X. tropicalis
JGI 7.1 Xetro.A01886.1 X. tropicalis
JGI 7.2 Xelaev16005976m X. laevis.L
JGI 6.0 XeXenL6RMv10010841m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_175000003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014343 X. tropicalis
JGI 4.1 e_gw1.175.101.1 X. tropicalis
JGI 4.1 e_gw1.175.41.1 X. tropicalis
JGI 4.1 e_gw1.175.99.1 X. tropicalis
JGI 4.1 gw1.175.101.1 X. tropicalis
JGI 4.1 gw1.175.41.1 X. tropicalis
JGI 4.1 gw1.175.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1750016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1750101 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1750010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1750039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1750040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1750009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_175000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_175000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_175000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_175000009 X. tropicalis

mRNAs (26)

Clone Accession Species Library Anatomy Stage
NM_001030334 X. tropicalis
TEgg056n21 CR760616 X. tropicalis
TGas057p22 CR762191 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu107k03 CU075755 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012963668 X. tropicalis
XM_012963664 X. tropicalis
XM_012963661 X. tropicalis
XM_012963652 X. tropicalis
XM_012963641 X. tropicalis
IMAGE:6318647 BC130124 X. laevis.L
IMAGE:8330050 BC160676 X. laevis.L
XM_018239935 X. laevis.S
XM_018239932 X. laevis.S
XM_018239931 X. laevis.S
XM_018256556 X. laevis.L
XM_018256545 X. laevis.L
XM_041562698 X. laevis.L
XM_041562694 X. laevis.L
XM_041562691 X. laevis.L
XM_041562685 X. laevis.L
XM_041579995 X. laevis.S
XM_041579994 X. laevis.S
XM_041579993 X. laevis.S
XM_041579992 X. laevis.S
XM_041579991 X. laevis.S
XM_041579990 X. laevis.S

ESTs (130)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8915074 EL827812 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857810 EL821704 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854333 EL815942 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853586 EL815518 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
st74a01 DC184956 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st7n04 DC175247 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st6n04 DC174957 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38e16 DC176227 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st31a10 DC172265 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30a23 DC171983 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st106g13 DC192834 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7001 CX940202 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO12574 CX963606 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9524 CX957962 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9229 CX957418 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5342 CX937199 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7542333 CX449018 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535805 CX476606 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569126 CX457806 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567044 CX507777 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7762075 DR883891 5' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7708643 CX961721 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7697962 CX930169 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693152 CX920080 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7665181 CX850057 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7515507 CX745725 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512819 CX741323 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TGas108m22 AL969874 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102c10 AL964968 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034n11 AL649276 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA077l17 BX732819 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu088h20 AL800894 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu135g10 AL796675 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107k03 AL793232 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121h14 AL788372 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072g05 AL785429 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064p20 AL783301 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079h23 AL776160 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas057d03 AL682709 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066o16 AL682531 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057p22 AL681679 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061d13 AL680293 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu046l14 AL659084 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu015b24 AL636021 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu042n24 AL660250 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046l15 AL658901 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6990678 CF217328 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8922336 EL837076 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915074 EL827813 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857810 EL821705 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854333 EL815943 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853586 EL815519 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst75a01 DC155069 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst74a01 DC154808 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst38e16 DC145927 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst6n04 DC144629 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst106g13 DC162864 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst31a10 DC141963 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst7n04 DC144917 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst30a23 DC141675 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO5342 CX937198 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO9524 CX957961 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693152 CX920079 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7762075 DR883890 3' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7687468 CX909238 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7515507 CX745724 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512819 CX741322 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7567044 CX507776 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569126 CX457805 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542333 CX449017 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas108m22 BX754046 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102c10 BX753704 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061d13 BX747605 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057p22 BX747405 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066o16 BX746877 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057d03 BX746038 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA077l17 BX732820 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu121h14 BX700742 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064p19 BX700205 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu088h20 BX696784 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107k03 BX692602 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064p20 BX689558 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu072g05 BX688976 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu079h23 BX686003 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6990678 CF217329 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl313k22 DC127142 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl287h19 DC119605 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl298n10 DC122680 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk134l07ex DC046760 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk152m17ex DC052588 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk158d08ex DC063507 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL477p11ex BP695598 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL409o20ex BP710304 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL515f02ex BP705573 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL512j05ex BP704570 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL434n14ex BP680446 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL413n21ex BP673471 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998K158658 BX845968 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL162g23 BJ613157 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5