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Summary Expression Phenotypes Gene Literature (52) GO Terms (101) Nucleotides (144) Proteins (50) Interactants (734) Wiki
XB-GENEPAGE-478083

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tbx1 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (31)
mRNAs (11)
ESTs (58)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001035118 NM_001035118.1 T-box transcription factor TBX1 3065 bp NP_001030290 X. tropicalis
NM_001096675 NM_001096675.1 T-box transcription factor TBX1-B 2690 bp NP_001090144 X. laevis.L
NM_001090445 NM_001090445.1 T-box transcription factor TBX1-A 1856 bp NP_001083914 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g2731 X. laevis.L
NCBI 10.1 XBXL10_1g5301 X. laevis.S
NCBI 10.0 XBXT10g017542 X. tropicalis
ENSEMBL 10.0 tbx1 X. tropicalis
Xenbase 9.2 gene20443 X. laevis.L
Xenbase 9.2 gene1166 X. laevis.S
JGI 9.1 Xelaev18007702m.g X. laevis.L
JGI 9.1 Xelaev18010548m.g X. laevis.S
Xenbase 9.1 gene2677 X. tropicalis
ENSEMBL 9.1 tbx1 X. tropicalis
JGI 7.2 Xelaev16052598m.g X. laevis.L
JGI 7.2 Xelaev16080314m.g X. laevis.S
JGI 7.1 Xetro.A00797 X. tropicalis
JGI 6.0 XeXenL6RMv10033196m.g X. laevis.S
JGI 6.0 XeXenL6RMv10052102m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006304 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_12000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120060 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120221 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120159 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000060 X. tropicalis
JGI 4.1 e_gw1.12.225.1 X. tropicalis
JGI 4.1 e_gw1.12.161.1 X. tropicalis
JGI 4.1 e_gw1.12.13.1 X. tropicalis
JGI 4.1 gw1.12.225.1 X. tropicalis
JGI 4.1 gw1.12.161.1 X. tropicalis
JGI 4.1 gw1.12.13.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120017 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA9857 X. laevis.S
NCBI 10.1 XBmRNA4798 X. laevis.L
ENSEMBL 10.0 ENSXETT00000091916 X. tropicalis
NCBI 10.0 mRNA086610 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105536 X. tropicalis
Xenbase 9.2 rna59711 X. laevis.L
Xenbase 9.2 rna3386 X. laevis.S
Xenbase 9.1 rna8875 X. tropicalis
JGI 9.1 Xelaev18007702m X. laevis.L
ENSEMBL 9.1 ENSXETT00000091916 X. tropicalis
JGI 9.1 Xelaev18010548m X. laevis.S
JGI 7.2 Xelaev16080314m X. laevis.S
JGI 7.2 Xelaev16052598m X. laevis.L
JGI 7.1 Xetro.A00797.1 X. tropicalis
JGI 6.0 XeXenL6RMv10033196m X. laevis.S
JGI 6.0 XeXenL6RMv10052102m X. laevis.L
JGI 4.1 gw1.12.13.1 X. tropicalis
JGI 4.1 e_gw1.12.161.1 X. tropicalis
JGI 4.1 e_gw1.12.225.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013817 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120060 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120017 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120159 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120221 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000060 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000017 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_12000007 X. tropicalis
JGI 4.1 e_gw1.12.13.1 X. tropicalis
JGI 4.1 gw1.12.161.1 X. tropicalis
JGI 4.1 gw1.12.225.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:9040172 BC170914 X. tropicalis
IMAGE:9040174 BC170916 X. tropicalis
TNeu106g11 CR926197 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
DQ124205 X. tropicalis
NM_001035118 X. tropicalis
tbx1-860 BC108602 X. laevis.L
NM_001096675 X. laevis.L
AF526274 X. laevis.S
IMAGE:9093494 BC170114 X. laevis.S
IMAGE:9093498 BC170118 X. laevis.S
NM_001090445 X. laevis.S

ESTs (58)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA077d23 CR429135 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA061p11 CR422403 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004g05 CR408116 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr43A01 CN115563 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
st12j13 DC166361 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7568536 CX457044 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5381441 BQ527125 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7620884 DR898548 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636169 CX406131 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622764 CX371938 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789389 CX334941 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA053i04 CR587613 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053i01 CR582615 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA025f02 CR577856 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA011a21 CR566426 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA016b10 CR564294 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu106g11 AL795815 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8889659 EL848485 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA053i04 CR587614 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7568536 CX457043 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu106g11 BX690320 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA004g05 CR408117 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA061p11 CR422404 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077d23 CR429136 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA016b10 CR564295 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA011a21 CR566427 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA025f02 CR577857 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053i01 CR582616 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
rst12j13 DC136304 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7789389 CX334940 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622764 CX371937 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636169 CX406130 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637707 CX407679 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620884 DR898547 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5381441 BQ527124 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
xthr43A01 CN115562 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8889659 EL848486 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5513998 CF286556 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL153h24 BJ096312 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl230k13 DC102865 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL017p09 BJ032857 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL086o21 BJ066692 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk101g14ex DC036077 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL052c08 BJ069219 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL101m05 BJ073875 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl326n18 DC131109 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238g10 DC105223 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk101g14ex DC003206 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl230k13 DC068766 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL153h24 BJ100558 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl326n18 DC095213 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL052c08 BJ086137 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl238g10 DC070965 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL025o17 BJ049376 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL101m05 BJ090127 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL017p09 BJ047872 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk153l06ex DC019532 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl298i08 DC087762 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15