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Summary Expression Phenotypes Gene Literature (17) GO Terms (23) Nucleotides (85) Proteins (37) Interactants (250) Wiki
XB-GENEPAGE-478961

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxd4 - All

RefSeq mRNAs(6)
Models - Gene (23)
Models - mRNA (23)
mRNAs (8)
ESTs (21)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_031892841 XM_031892841.1 XP_031748701.1 homeobox protein Hox-D4 3230 bp XP_031748701 X. tropicalis
NM_001173995 NM_001173995.1 homeobox D4 L homeolog 1660 bp NP_001167466 X. laevis.L
XM_041575450 XM_041575450.1 XP_041431384.1 homeobox D4 L homeolog isoform X1 3166 bp XP_041431384 X. laevis.L
XM_041578032 XM_041578032.1 XP_041433966.1 homeobox protein Hox-D4 6240 bp XP_041433966 X. laevis.S
XM_041578033 XM_041578033.1 XP_041433967.1 homeobox protein Hox-D4 4206 bp XP_041433967 X. laevis.S
XM_041578034 XM_041578034.1 XP_041433968.1 homeobox protein Hox-D4 4193 bp XP_041433968 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g43526 X. laevis.S
NCBI 10.1 XBXL10_1g40727 X. laevis.L
NCBI 10.0 XBXT10g002377 X. tropicalis
Xenbase 9.2 gene2712 X. laevis.L
JGI 9.1 Xelaev18044737m.g X. laevis.L
JGI 9.1 Xelaev18047204m.g X. laevis.S
JGI 8.0 Xetrov14037304m.g X. tropicalis
JGI 7.1 Xetro.I00366 X. tropicalis
JGI 6.0 XeXenL6RMv10039946m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001799 X. tropicalis
JGI 4.1 e_gw1.163.192.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1630006 X. tropicalis
JGI 4.1 gw1.163.192.1 X. tropicalis
JGI 4.1 gw1.163.212.1 X. tropicalis
JGI 4.1 gw1.163.27.1 X. tropicalis
JGI 4.1 e_gw1.163.212.1 X. tropicalis
JGI 4.1 e_gw1.163.27.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1630006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630192 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630212 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA76696 X. laevis.L
NCBI 10.1 XBmRNA81896 X. laevis.S
NCBI 10.0 mRNA012052 X. tropicalis
Xenbase 9.2 rna7871 X. laevis.L
JGI 9.1 Xelaev18044737m X. laevis.L
JGI 9.1 Xelaev18047204m X. laevis.S
JGI 8.0 Xetrov14037304m X. tropicalis
JGI 7.1 Xetro.I00366.1 X. tropicalis
JGI 6.0 XeXenL6RMv10039946m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_163000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000006 X. tropicalis
JGI 4.1 e_gw1.163.192.1 X. tropicalis
JGI 4.1 gw1.163.212.1 X. tropicalis
JGI 4.1 gw1.163.27.1 X. tropicalis
JGI 4.1 gw1.163.192.1 X. tropicalis
JGI 4.1 e_gw1.163.212.1 X. tropicalis
JGI 4.1 e_gw1.163.27.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003765 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1630006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1630006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630192 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1630212 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_031892841 X. tropicalis
AY422086 X. laevis.L
IMAGE:7982125 BC110765 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001173995 X. laevis.L
XM_041575450 X. laevis.L
XM_041578032 X. laevis.S
XM_041578033 X. laevis.S
XM_041578034 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA020f12 BX712366 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA032j04 BX743376 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7620966 CX341575 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st80c04 DC186527 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8889425 EL848516 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7620966 CX341574 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu051o22 BX700052 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA020f12 BX712367 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8889425 EL848517 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTpA032j04 BX743377 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
rst51h20 DC149087 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5571854 BQ736637 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
xl223i02 DC100660 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL014j02 BJ031771 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7982125 DR717690 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL094l20 BJ071546 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl280e05 DC082917 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl221l20 DC082251 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl223i02 DC066730 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL094l20 BJ091302 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7982125 DR717753 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19