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Summary Expression Phenotypes Gene Literature (1) GO Terms (15) Nucleotides (90) Proteins (48) Interactants (21) Wiki
XB-GENEPAGE-480219

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pcdh17 - All

RefSeq mRNAs(15)
Models - Gene (19)
Models - mRNA (23)
mRNAs (15)
ESTs (16)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
XM_002936924 protocadherin-17 isoform X1 6782 bp XP_002936970 X. tropicalis
XM_012957791 XM_012957791.3 protocadherin-17 isoform X2 8069 bp XP_012813245 X. tropicalis
XM_031897118 XM_031897118.1 XP_031752978.1 protocadherin-17 isoform X3 6719 bp XP_031752978 X. tropicalis
XM_031897119 XM_031897119.1 XP_031752979.1 protocadherin-17 isoform X4 8006 bp XP_031752979 X. tropicalis
XM_018247301 XM_018247301.2 protocadherin-17 isoform X1 6762 bp XP_018102790 X. laevis.L
XM_018247302 XM_018247302.2 protocadherin-17 isoform X3 7531 bp XP_018102791 X. laevis.L
XM_041582457 XM_041582457.1 XP_041438391.1 protocadherin-17 isoform X1 6768 bp XP_041438391 X. laevis.L
XM_041582458 XM_041582458.1 XP_041438392.1 protocadherin-17 isoform X2 6760 bp XP_041438392 X. laevis.L
XM_041582459 XM_041582459.1 XP_041438393.1 protocadherin-17 isoform X4 7528 bp XP_041438393 X. laevis.L
XM_041582460 XM_041582460.1 XP_041438394.1 protocadherin-17 isoform X5 6700 bp XP_041438394 X. laevis.L
XM_041582461 XM_041582461.1 XP_041438395.1 protocadherin-17 isoform X6 7468 bp XP_041438395 X. laevis.L
XM_041584341 XM_041584341.1 XP_041440275.1 protocadherin-17 isoform X1 4963 bp XP_041440275 X. laevis.S
XM_041584342 XM_041584342.1 XP_041440276.1 protocadherin-17 isoform X2 4960 bp XP_041440276 X. laevis.S
XM_041584343 XM_041584343.1 XP_041440277.1 protocadherin-17 isoform X3 5774 bp XP_041440277 X. laevis.S
XM_041584344 XM_041584344.1 XP_041440278.1 protocadherin-17 isoform X4 5771 bp XP_041440278 X. laevis.S

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g7925 X. laevis.L
NCBI 10.1 XBXL10_1g10593 X. laevis.S
NCBI 10.0 XBXT10g009246 X. tropicalis
ENSEMBL 10.0 pcdh17 X. tropicalis
Xenbase 9.2 gene43422 X. laevis.S
Xenbase 9.2 gene47688 X. laevis.L
JGI 9.1 Xelaev18015745m.g X. laevis.S
JGI 9.1 Xelaev18013223m.g X. laevis.L
Xenbase 9.1 gene16119 X. tropicalis
ENSEMBL 9.1 pcdh17 X. tropicalis
JGI 7.1 Xetro.B01295 X. tropicalis
JGI 6.0 XeXenL6RMv10023816m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013565 X. tropicalis
JGI 4.1 e_gw1.249.26.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_249000002 X. tropicalis
JGI 4.1 e_gw1.249.1.1 X. tropicalis
JGI 4.1 AMZ_fgenesh1_pg.C_scaffold_249000002 X. tropicalis
JGI 4.1 gw1.249.26.1 X. tropicalis
JGI 4.1 gw1.249.1.1 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA19870 X. laevis.S
NCBI 10.1 XBmRNA14982 X. laevis.L
ENSEMBL 10.0 ENSXETT00000029750 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071186 X. tropicalis
NCBI 10.0 mRNA045727 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114287 X. tropicalis
Xenbase 9.2 rna92923 X. laevis.L
Xenbase 9.2 rna86808 X. laevis.S
Xenbase 9.1 rna35588 X. tropicalis
JGI 9.1 Xelaev18015745m X. laevis.S
JGI 9.1 Xelaev18013223m X. laevis.L
ENSEMBL 9.1 ENSXETT00000071186 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029750 X. tropicalis
JGI 7.1 Xetro.B01295.1 X. tropicalis
JGI 7.1 Xetro.B01295.2 X. tropicalis
JGI 6.0 XeXenL6RMv10023816m X. laevis.L
JGI 4.1 gw1.249.26.1 X. tropicalis
JGI 4.1 e_gw1.249.26.1 X. tropicalis
JGI 4.1 e_gw1.249.1.1 X. tropicalis
JGI 4.1 AMZ_fgenesh1_pg.C_scaffold_249000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029750 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_249000002 X. tropicalis
JGI 4.1 gw1.249.1.1 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
XM_002936924 X. tropicalis
XM_012957791 X. tropicalis
XM_031897118 X. tropicalis
XM_031897119 X. tropicalis
XM_018247301 X. laevis.L
XM_018247302 X. laevis.L
XM_041582457 X. laevis.L
XM_041582458 X. laevis.L
XM_041582459 X. laevis.L
XM_041582460 X. laevis.L
XM_041582461 X. laevis.L
XM_041584341 X. laevis.S
XM_041584342 X. laevis.S
XM_041584343 X. laevis.S
XM_041584344 X. laevis.S

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA012c02 BX706257 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7593293 CX327036 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA078k20 BX736094 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
CN075221 CN075221 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTpA027k12 BX716012 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7663293 CX845856 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8916124 EL828925 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA012c03 BX703809 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8916124 EL828926 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA012c03 BX703810 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA012c02 BX706258 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA027k12 BX716013 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078k20 BX736095 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7593293 CX327035 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CN075220 CN075220 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7663293 CX845855 3' X. tropicalis NIH_XGC_tropBrn3 brain frog