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Summary Expression Phenotypes Gene Literature (20) GO Terms (33) Nucleotides (174) Proteins (58) Interactants (315) Wiki
XB-GENEPAGE-482266

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxa3 - All

RefSeq mRNAs(20)
Models - Gene (29)
Models - mRNA (29)
mRNAs (22)
ESTs (32)

RefSeq mRNAs (20)

Accession Version Protein Name Length Protein Species
NM_001127429 NM_001127429.1 homeobox protein Hox-A3 2181 bp NP_001120901 X. tropicalis
XM_012964321 XM_012964321.3 homeobox protein Hox-A3 isoform X1 2211 bp XP_012819775 X. tropicalis
XM_012964323 XM_012964323.3 homeobox protein Hox-A3 isoform X1 2246 bp XP_012819777 X. tropicalis
XM_012964324 XM_012964324.3 homeobox protein Hox-A3 isoform X1 2881 bp XP_012819778 X. tropicalis
XM_012964325 XM_012964325.3 homeobox protein Hox-A3 isoform X1 1997 bp XP_012819779 X. tropicalis
XM_012964328 XM_012964328.3 homeobox protein Hox-A3 isoform X1 4934 bp XP_012819782 X. tropicalis
XM_018094556 XM_018094556.2 homeobox protein Hox-A3 isoform X1 2485 bp XP_017950045 X. tropicalis
XM_031903233 XM_031903233.1 XP_031759093.1 homeobox protein Hox-A3 isoform X1 2209 bp XP_031759093 X. tropicalis
NM_001086824 NM_001086824.1 homeobox A3 S homeolog 2287 bp NP_001080293 X. laevis.S
XM_018268571 XM_018268571.2 homeobox A3 S homeolog isoform X1 2127 bp XP_018124060 X. laevis.S
XM_018268575 XM_018268575.2 homeobox A3 S homeolog isoform X1 3049 bp XP_018124064 X. laevis.S
XM_018268576 XM_018268576.2 homeobox A3 S homeolog isoform X1 2642 bp XP_018124065 X. laevis.S
XM_018268577 XM_018268577.2 homeobox A3 S homeolog isoform X1 2268 bp XP_018124066 X. laevis.S
XM_041567078 XM_041567078.1 XP_041423012.1 homeobox A3 S homeolog isoform X1 2374 bp XP_041423012 X. laevis.S
XM_018267404 XM_018267404.2 homeobox protein Hox-A3 2279 bp XP_018122893 X. laevis.L
XM_018267405 XM_018267405.2 homeobox protein Hox-A3 2377 bp XP_018122894 X. laevis.L
XM_018267411 XM_018267411.2 homeobox protein Hox-A3 2316 bp XP_018122900 X. laevis.L
XM_041565984 XM_041565984.1 XP_041421918.1 homeobox protein Hox-A3 3011 bp XP_041421918 X. laevis.L
XM_041565985 XM_041565985.1 XP_041421919.1 homeobox protein Hox-A3 2514 bp XP_041421919 X. laevis.L
XM_041565986 XM_041565986.1 XP_041421920.1 homeobox protein Hox-A3 3333 bp XP_041421920 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g28963 X. laevis.S
NCBI 10.1 XBXL10_1g27090 X. laevis.L
NCBI 10.0 XBXT10g004398 X. tropicalis
ENSEMBL 10.0 hoxa3 X. tropicalis
Xenbase 9.2 gene15734 X. laevis.L
Xenbase 9.2 gene17780 X. laevis.S
JGI 9.1 Xelaev18033069m.g X. laevis.S
JGI 9.1 Xelaev18030985m.g X. laevis.L
Xenbase 9.1 gene7722 X. tropicalis
ENSEMBL 9.1 hoxa3 X. tropicalis
JGI 8.0 Xetrov14027204m.g X. tropicalis
JGI 7.2 Xelaev16080918m.g X. laevis.S
JGI 7.1 Xetro.F01338 X. tropicalis
JGI 6.0 XeXenL6RMv10002119m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000717 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_56000014 X. tropicalis
JGI 4.1 e_gw1.56.117.1 X. tropicalis
JGI 4.1 e_gw1.56.170.1 X. tropicalis
JGI 4.1 e_gw1.56.39.1 X. tropicalis
JGI 4.1 gw1.56.117.1 X. tropicalis
JGI 4.1 gw1.56.170.1 X. tropicalis
JGI 4.1 gw1.56.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_560026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560170 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_560014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560039 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA50738 X. laevis.L
NCBI 10.1 XBmRNA54491 X. laevis.S
ENSEMBL 10.0 ENSXETT00000001602 X. tropicalis
NCBI 10.0 mRNA021958 X. tropicalis
Xenbase 9.2 rna45955 X. laevis.L
Xenbase 9.2 rna51973 X. laevis.S
Xenbase 9.1 rna24848 X. tropicalis
JGI 9.1 Xelaev18030985m X. laevis.L
JGI 9.1 Xelaev18033069m X. laevis.S
ENSEMBL 9.1 ENSXETT00000001602 X. tropicalis
JGI 8.0 Xetrov14027204m X. tropicalis
JGI 7.2 Xelaev16080918m X. laevis.S
JGI 7.1 Xetro.F01338.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002119m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_560014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_560045 X. tropicalis
JGI 4.1 e_gw1.56.39.1 X. tropicalis
JGI 4.1 e_gw1.56.170.1 X. tropicalis
JGI 4.1 e_gw1.56.117.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001602 X. tropicalis
JGI 4.1 gw1.56.39.1 X. tropicalis
JGI 4.1 gw1.56.170.1 X. tropicalis
JGI 4.1 gw1.56.117.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_56000014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560170 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_56000045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_560039 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_560026 X. tropicalis

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
IMAGE:8952652 BC166398 X. tropicalis NICHD_XGC_tropInt_62 intestine frog
NM_001127429 X. tropicalis
XM_012964321 X. tropicalis
XM_012964323 X. tropicalis
XM_012964324 X. tropicalis
XM_012964325 X. tropicalis
XM_012964328 X. tropicalis
XM_018094556 X. tropicalis
XM_031903233 X. tropicalis
IMAGE:4683538 BC041731 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086824 X. laevis.S
XM_018268571 X. laevis.S
XM_018268575 X. laevis.S
XM_018268576 X. laevis.S
XM_018268577 X. laevis.S
XM_041567078 X. laevis.S
XM_018267404 X. laevis.L
XM_018267405 X. laevis.L
XM_018267411 X. laevis.L
XM_041565984 X. laevis.L
XM_041565985 X. laevis.L
XM_041565986 X. laevis.L

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA062a12 CR425002 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas116h16 AL961883 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6990888 CF217043 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA045b24 CR584873 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA022l17 CR587191 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7785063 CX315547 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu034l11 AL657046 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu039b16 AL660840 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8965826 EL656560 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8888736 EL847460 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8944095 EG654297 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8952652 EG653237 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
xtbs06N05 CN092448 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTbA048k04 CR422631 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7515811 CX746475 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8888736 EL847461 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7515811 CX746474 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TGas116h16 BX755853 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA048k04 CR422632 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062a12 CR425003 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA058i05 CR429676 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7785063 CX315546 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs06N05 CN092447 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:5515508 CF290501 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4683538 BQ732788 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6937349 CD099396 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL047f17 BJ040713 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
77K7A BG354653 5' X. laevis.S Harland stage 19-23 Xenopus laevis cDNA whole organism NF stage 19 to NF stage 23
IMAGE:7973878 DR719020 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGp998A1110567 BX853034 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL047f17 BJ055089 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7973878 DR718983 3' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19