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Summary Expression Phenotypes Gene Literature (245) GO Terms (23) Nucleotides (592) Proteins (51) Interactants (1588) Wiki
XB-GENEPAGE-484814

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sox3 - All

Models - Gene (32)
Models - mRNA (32)
mRNAs (43)
ESTs (408)

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g38013 X. laevis.S
NCBI 10.1 XBXL10_1g35158 X. laevis.L
NCBI 10.0 XBXT10g008032 X. tropicalis
Xenbase 9.2 gene13271 X. laevis.S
Xenbase 9.2 gene10152 X. laevis.L
Xenbase 9.1 gene1106 X. tropicalis
JGI 9.1 Xelaev18042169m.g X. laevis.S
JGI 9.1 Xelaev18038842m.g X. laevis.L
JGI 8.0 Xetrov14033323m.g X. tropicalis
JGI 7.2 Xelaev16015647m.g X. laevis.S
JGI 7.1 Xetro.H00710 X. tropicalis
JGI 6.0 XeXenL6RMv10039689m.g X. laevis.S
JGI 6.0 XeXenL6RMv10047736m.g X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_62000001 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007607 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_620007 X. tropicalis
JGI 4.1 e_gw1.62.20.1 X. tropicalis
JGI 4.1 e_gw1.62.63.1 X. tropicalis
JGI 4.1 e_gw1.62.64.1 X. tropicalis
JGI 4.1 gw1.62.20.1 X. tropicalis
JGI 4.1 gw1.62.63.1 X. tropicalis
JGI 4.1 gw1.62.64.1 X. tropicalis
JGI 4.1 TIM_fgenesh1_kg.C_scaffold_62000001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_620001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_620004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000023 X. tropicalis

Models - mRNA (32)

Source Version Model Species
NCBI 10.1 XBmRNA66382 X. laevis.L
NCBI 10.1 XBmRNA71859 X. laevis.S
NCBI 10.0 mRNA039881 X. tropicalis
Xenbase 9.2 rna29524 X. laevis.L
Xenbase 9.2 rna38625 X. laevis.S
JGI 9.1 Xelaev18038842m X. laevis.L
JGI 9.1 Xelaev18042169m X. laevis.S
Xenbase 9.1 rna3540 X. tropicalis
JGI 8.0 Xetrov14033323m X. tropicalis
JGI 7.2 Xelaev16015647m X. laevis.S
JGI 7.1 Xetro.H00710.1 X. tropicalis
JGI 6.0 XeXenL6RMv10039689m X. laevis.S
JGI 6.0 XeXenL6RMv10047736m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_62000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016558 X. tropicalis
JGI 4.1 e_gw1.62.20.1 X. tropicalis
JGI 4.1 e_gw1.62.63.1 X. tropicalis
JGI 4.1 e_gw1.62.64.1 X. tropicalis
JGI 4.1 gw1.62.20.1 X. tropicalis
JGI 4.1 gw1.62.63.1 X. tropicalis
JGI 4.1 gw1.62.64.1 X. tropicalis
JGI 4.1 TIM_fgenesh1_kg.C_scaffold_62000001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_620007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_620001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_620004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000023 X. tropicalis

mRNAs (43)

Clone Accession Species Library Anatomy Stage
IMAGE:6979162 BC079938 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas079n14 CT030436 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001007501 X. tropicalis
IMAGE:6322726 BC089283 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6635221 BC072222 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
30F5-2 AJ009310 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
NM_001173404 X. laevis.L
AB000825 X. laevis.S
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
NM_001090679 X. laevis.S
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L

ESTs (408)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:4461644 BG816436 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4461448 BG884651 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas019j19 AL631600 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas015k10 AL631826 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013a12 AL632185 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037n07 AL647678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033k13 AL648444 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032p17 AL648557 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033b24 AL648933 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033n08 AL648997 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040k18 AL651230 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040n10 AL651389 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043k19 AL651468 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035o02 AL654242 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079n14 AL774680 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074n04 AL782451 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100c19 AL956115 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136e10 AL963440 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090l02 AL964006 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090n04 AL964017 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083c06 AL964132 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143d24 AL964426 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101i10 AL965067 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083b05 AL966152 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137b22 AL966625 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143k23 AL968679 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas065h13 AL674617 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas059c13 AL678596 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061n12 AL680530 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas012k11 AL629265 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021h03 AL632769 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033j18 AL648978 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas085e24 AL960548 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005o12 AL594284 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas002m17 AL594980 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas005p11 AL595534 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu029i20 AL650524 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030g15 AL650772 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061b17 AL673881 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu055m07 AL676839 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066g23 AL778279 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073n09 AL782099 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096f04 AL786894 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108h20 AL790759 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108j18 AL790770 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119d09 AL792356 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu143h22 AL796199 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124c09 AL802352 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098h23 AL802996 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084m04 AL804093 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6986301 CF222040 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990074 CF218304 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990074 CF218305 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989981 CF219075 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989981 CF219076 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989849 CF219296 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989849 CF219297 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6995582 CF239260 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5382995 BQ394671 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383055 BQ394706 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383825 BQ396380 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6979162 CF148549 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5336631 BQ522107 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379596 BQ523344 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA021c23 BX705637 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA045p11 BX725069 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA067m21 BX735627 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr04E16 CN120340 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA035e19 CR429889 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA007m20 CR448373 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA045a18 CR449328 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA004m10 CR563989 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014j19 CR565261 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017m11 CR568321 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019i12 CR571682 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032e18 CR577974 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032e20 CR577975 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA030g12 CR582534 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA048l08 CR584250 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7629069 CX383057 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637150 DR903191 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600378 CX345247 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606830 CX367052 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7553972 CX493050 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528776 CX425832 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529630 CX426630 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524598 CX439553 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525092 CX439810 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522714 CX471996 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520677 CX481076 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571932 CX513173 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555918 CX503744 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565528 CX482542 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566149 CX482870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570457 CX454992 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573238 CX436871 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531184 CX420677 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532779 CX433320 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534477 CX428778 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5