Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (233) GO Terms (25) Nucleotides (588) Proteins (49) Interactants (1592) Wiki
XB-GENEPAGE-484814

All tropicalis laevis

Nucleotide sequences for sox3 - All

Models - Gene (30)
Models - mRNA (30)
Unigene Clusters (7)
Gurdon EST Clusters (2)
mRNAs (43)
ESTs (408)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g008032 X. tropicalis
Xenbase 9.1 gene1106 X. tropicalis
JGI 9.1 Xelaev18042169m.g X. laevis.S
Xenbase 9.2 gene13271 X. laevis.S
JGI 9.1 Xelaev18038842m.g X. laevis.L
Xenbase 9.2 gene10152 X. laevis.L
JGI 8.0 Xetrov14033323m.g X. tropicalis
JGI 7.1 Xetro.H00710 X. tropicalis
JGI 7.2 Xelaev16015647m.g X. laevis.S
JGI 6.0 XeXenL6RMv10039689m.g X. laevis.S
JGI 6.0 XeXenL6RMv10047736m.g X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_62000001 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007607 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_620007 X. tropicalis
JGI 4.1 e_gw1.62.20.1 X. tropicalis
JGI 4.1 e_gw1.62.63.1 X. tropicalis
JGI 4.1 e_gw1.62.64.1 X. tropicalis
JGI 4.1 gw1.62.20.1 X. tropicalis
JGI 4.1 gw1.62.63.1 X. tropicalis
JGI 4.1 gw1.62.64.1 X. tropicalis
JGI 4.1 TIM_fgenesh1_kg.C_scaffold_62000001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_620001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_620004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000023 X. tropicalis

Models - mRNA (30)

Source Version Model Species
NCBI 10.0 mRNA039881 X. tropicalis
JGI 9.1 Xelaev18038842m X. laevis.L
JGI 9.1 Xelaev18042169m X. laevis.S
Xenbase 9.1 rna3540 X. tropicalis
Xenbase 9.2 rna29524 X. laevis.L
Xenbase 9.2 rna38625 X. laevis.S
JGI 8.0 Xetrov14033323m X. tropicalis
JGI 7.1 Xetro.H00710.1 X. tropicalis
JGI 7.2 Xelaev16015647m X. laevis.S
JGI 6.0 XeXenL6RMv10039689m X. laevis.S
JGI 6.0 XeXenL6RMv10047736m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_62000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016558 X. tropicalis
JGI 4.1 e_gw1.62.20.1 X. tropicalis
JGI 4.1 e_gw1.62.63.1 X. tropicalis
JGI 4.1 e_gw1.62.64.1 X. tropicalis
JGI 4.1 gw1.62.20.1 X. tropicalis
JGI 4.1 gw1.62.63.1 X. tropicalis
JGI 4.1 gw1.62.64.1 X. tropicalis
JGI 4.1 TIM_fgenesh1_kg.C_scaffold_62000001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_620007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_620064 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_620001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_620023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_620004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_62000023 X. tropicalis

Gurdon EST Clusters (2)

ID Species
1012159174 X. tropicalis
1012767321 X. laevis.S

mRNAs (43)

Clone Accession Species Library Anatomy Stage
IMAGE:6979162 BC079938 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas079n14 CT030436 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001007501 X. tropicalis
IMAGE:6322726 BC089283 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6635221 BC072222 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
30F5-2 AJ009310 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
Y07542 Y07542 X. laevis.S
NM_001173404 X. laevis.L
AB000825 X. laevis.S
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
NM_001090679 X. laevis.S
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L
X65654 X65654 X. laevis.L

ESTs (408)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9020182 EL869589 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9017108 EL864527 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9016134 EL863310 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010565 EL854672 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890659 EL850355 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st4b11 DC174166 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st51p18 DC179477 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st43a19 DC177401 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st41a05 DC176970 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38k20 DC176349 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st31k12 DC172435 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2n18 DC171925 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2a13 DC171680 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29m15 DC171619 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28l02 DC171290 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21e11 DC169177 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35a17 DC173313 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34c24 DC173097 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st19a22 DC168283 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st10f20 DC165703 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20h09 DC168945 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st10c05 DC165629 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st110k03 DC194543 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st109a16 DC194163 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st105l08 DC191913 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st105d21 DC191799 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st104n07 DC191700 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st103i02 DC191377 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st102i02 DC191155 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100i02 DC190719 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100e16 DC190663 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st82k13 DC187142 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79p23 DC186499 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st79b16 DC186268 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7629069 CX383057 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7553972 CX493050 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552123 CX494274 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552107 CX494168 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549906 CX485432 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547072 CX501003 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547137 CX500793 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7606830 CX367052 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600378 CX345247 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7545893 CX488739 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539387 CX452163 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538254 CX450617 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537433 CX446329 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536378 CX478009 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534477 CX428778 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532779 CX433320 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531184 CX420677 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573238 CX436871 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570457 CX454992 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566149 CX482870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565528 CX482542 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555918 CX503744 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571932 CX513173 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7637150 DR903191 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7670216 CX877248 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7514297 CX743782 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513182 CX742167 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7520677 CX481076 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522714 CX471996 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525092 CX439810 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524598 CX439553 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529630 CX426630 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528776 CX425832 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA048l08 CR584250 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA030g12 CR582534 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032e20 CR577975 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA032e18 CR577974 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019i12 CR571682 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017m11 CR568321 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014j19 CR565261 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA004m10 CR563989 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA045a18 CR449328 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA007m20 CR448373 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA035e19 CR429889 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04E16 CN120340 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas143k23 AL968679 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137b22 AL966625 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083b05 AL966152 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas101i10 AL965067 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143d24 AL964426 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083c06 AL964132 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090n04 AL964017 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas090l02 AL964006 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136e10 AL963440 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas100c19 AL956115 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas074n04 AL782451 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079n14 AL774680 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035o02 AL654242 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043k19 AL651468 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040n10 AL651389 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040k18 AL651230 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033n08 AL648997 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033b24 AL648933 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032p17 AL648557 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033k13 AL648444 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12