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Summary Expression Phenotypes Gene Literature (12) GO Terms (8) Nucleotides (140) Proteins (73) Interactants (258) Wiki
XB-GENEPAGE-487031

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sox5 - All

Models - Gene (25)
Models - mRNA (30)
mRNAs (21)
ESTs (41)

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g003645 X. tropicalis
NCBI 10.1 XBXL10_1g14948 X. laevis.S
NCBI 10.1 XBXL10_1g11362 X. laevis.L
ENSEMBL 10.0 sox5 X. tropicalis
JGI 9.1 Xelaev18019705m.g X. laevis.S
JGI 9.1 Xelaev18016612m.g X. laevis.L
Xenbase 9.1 gene28731 X. tropicalis
Xenbase 9.2 gene42512 X. laevis.S
Xenbase 9.2 gene39640 X. laevis.L
ENSEMBL 9.1 sox5 X. tropicalis
JGI 7.1 Xetro.K02239 X. tropicalis
JGI 7.2 Xelaev16069287m.g X. laevis.S
JGI 6.0 XeXenL6RMv10017467m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000026458 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1126000002 X. tropicalis
JGI 4.1 gw1.1126.20.1 X. tropicalis
JGI 4.1 gw1.1126.21.1 X. tropicalis
JGI 4.1 gw1.1126.3.1 X. tropicalis
JGI 4.1 e_gw1.1126.20.1 X. tropicalis
JGI 4.1 e_gw1.1126.21.1 X. tropicalis
JGI 4.1 e_gw1.1126.27.1 X. tropicalis
JGI 4.1 e_gw1.1126.3.1 X. tropicalis
JGI 4.1 gw1.1126.27.1 X. tropicalis
JGI 4.1 TIM_1004485456 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1126000001 X. tropicalis

Models - mRNA (30)

Source Version Model Species
NCBI 10.0 mRNA018431 X. tropicalis
NCBI 10.1 XBmRNA21350 X. laevis.L
NCBI 10.1 XBmRNA27818 X. laevis.S
ENSEMBL 10.0 ENSXETT00000109088 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107892 X. tropicalis
ENSEMBL 10.0 ENSXETT00000055793 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100581 X. tropicalis
JGI 9.1 Xelaev18016612m X. laevis.L
JGI 9.1 Xelaev18019705m X. laevis.S
Xenbase 9.1 rna55583 X. tropicalis
Xenbase 9.2 rna81290 X. laevis.L
Xenbase 9.2 rna85454 X. laevis.S
ENSEMBL 9.1 ENSXETT00000100581 X. tropicalis
ENSEMBL 9.1 ENSXETT00000055793 X. tropicalis
JGI 7.1 Xetro.K02239.2 X. tropicalis
JGI 7.1 Xetro.K02239.1 X. tropicalis
JGI 7.2 Xelaev16069287m X. laevis.S
JGI 6.0 XeXenL6RMv10017467m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_1126000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055793 X. tropicalis
JGI 4.1 e_gw1.1126.20.1 X. tropicalis
JGI 4.1 e_gw1.1126.21.1 X. tropicalis
JGI 4.1 e_gw1.1126.27.1 X. tropicalis
JGI 4.1 e_gw1.1126.3.1 X. tropicalis
JGI 4.1 gw1.1126.20.1 X. tropicalis
JGI 4.1 gw1.1126.21.1 X. tropicalis
JGI 4.1 gw1.1126.3.1 X. tropicalis
JGI 4.1 gw1.1126.27.1 X. tropicalis
JGI 4.1 TIM_1004485456 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1126000001 X. tropicalis

mRNAs (21)

Clone Accession Species Library Anatomy Stage
THdA019c19 CU075480 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7604115 BC167694 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001128658 X. tropicalis
XM_031897506 X. tropicalis
XM_031897505 X. tropicalis
XM_031897504 X. tropicalis
X65653 X65653 X. laevis.S
IMAGE:7974690 BC142559 X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
NM_001174037 X. laevis.S
XM_018251834 X. laevis.L
XM_018251832 X. laevis.L
XM_018251831 X. laevis.L
XM_018251830 X. laevis.L
XM_018254027 X. laevis.S
XM_018254026 X. laevis.S
XM_018254025 X. laevis.S
AB682776 X. laevis.S
XM_041585795 X. laevis.L
XM_041587487 X. laevis.S
XM_041587486 X. laevis.S
XM_041587485 X. laevis.S

ESTs (41)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs20L16 CN082316 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st41f15 DC177041 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st94o21 DC190098 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT498 CX359166 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604115 CX395668 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7535976 CX477549 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7719838 CX983741 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA019c19 CR582048 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040l10 CR576013 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040m19 CR573960 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA001o10 CR447294 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA057h11 CR446352 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr38P08 CN112609 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26A18 CN104642 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu036k11 AL661470 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu024h02 AL643985 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu025i02 AL642399 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst94o21 DC160092 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst34l11 DC142978 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst33l11 DC142701 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst41f15 DC146742 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT498 CX359165 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7719838 CX983740 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7535976 CX477548 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7604115 CX395667 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA019c19 CR582049 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA030h02 CR579764 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040l10 CR576014 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040m19 CR573961 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA057h11 CR446353 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr38P08 CN112608 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr26A18 CN104641 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xl265l18 DC113474 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk115c07ex DC040447 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7980688 DR727986 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981294 DR718542 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979694 DR715647 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7974690 DR715244 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL220c12 BJ628001 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk115c07ex DC007530 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7981294 DR718509 3' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19