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Summary Expression Phenotypes Gene Literature (230) GO Terms (108) Nucleotides (126) Proteins (56) Interactants (833) Wiki
XB-GENEPAGE-487965

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nkx2-5 - All

RefSeq mRNAs(4)
Models - Gene (34)
Models - mRNA (35)
mRNAs (8)
ESTs (11)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001123419 NM_001123419.1 homeobox protein Nkx-2.5 1924 bp NP_001116891 X. tropicalis
NM_001086721 NM_001086721.1 homeobox protein Nkx-2.5 2506 bp NP_001080190 X. laevis.S
NM_001172192 NM_001172192.1 NK2 homeobox 5 L homeolog 903 bp NP_001165663 X. laevis.L
XM_018250580 XM_018250580.2 NK2 homeobox 5 L homeolog isoform X1 1466 bp XP_018106069 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g12332 X. laevis.L
NCBI 10.1 XBXL10_1g16457 X. laevis.S
NCBI 10.0 XBXT10g001992 X. tropicalis
ENSEMBL 10.0 nkx2-5 X. tropicalis
Xenbase 9.2 gene14279 X. laevis.S
Xenbase 9.2 gene11130 X. laevis.L
JGI 9.1 Xelaev18021415m.g X. laevis.S
JGI 9.1 Xelaev18017250m.g X. laevis.L
Xenbase 9.1 gene5220 X. tropicalis
ENSEMBL 9.1 nkx2-5 X. tropicalis
JGI 7.2 Xelaev16065014m.g X. laevis.S
JGI 7.2 Xelaev16023710m.g X. laevis.L
JGI 7.1 Xetro.C01394 X. tropicalis
JGI 6.0 XeXenL6RMv10014433m.g X. laevis.L
JGI 6.0 XeXenL6RMv10020692m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000012729 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_230000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_230000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000018 X. tropicalis
JGI 4.1 e_gw1.230.50.1 X. tropicalis
JGI 4.1 e_gw1.230.51.1 X. tropicalis
JGI 4.1 e_gw1.230.52.1 X. tropicalis
JGI 4.1 gw1.230.50.1 X. tropicalis
JGI 4.1 gw1.230.51.1 X. tropicalis
JGI 4.1 gw1.230.52.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2300011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300052 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2300002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2300017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2300018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2300008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000017 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA23050 X. laevis.L
NCBI 10.1 XBmRNA30902 X. laevis.S
ENSEMBL 10.0 ENSXETT00000060367 X. tropicalis
NCBI 10.0 mRNA010009 X. tropicalis
Xenbase 9.2 rna32347 X. laevis.L
Xenbase 9.2 rna41595 X. laevis.S
JGI 9.1 Xelaev18021415m X. laevis.S
Xenbase 9.1 rna16966 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060367 X. tropicalis
JGI 9.1 Xelaev18017250m X. laevis.L
JGI 7.2 Xelaev16065014m X. laevis.S
JGI 7.2 Xelaev16023710m X. laevis.L
JGI 7.1 Xetro.C01394.2 X. tropicalis
JGI 7.1 Xetro.C01394.1 X. tropicalis
JGI 6.0 XeXenL6RMv10014433m X. laevis.L
JGI 6.0 XeXenL6RMv10020692m X. laevis.S
JGI 4.1 gw1.230.50.1 X. tropicalis
JGI 4.1 gw1.230.51.1 X. tropicalis
JGI 4.1 gw1.230.52.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_230000008 X. tropicalis
JGI 4.1 e_gw1.230.51.1 X. tropicalis
JGI 4.1 e_gw1.230.52.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027831 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2300002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2300017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2300018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2300008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2300011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2300052 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_230000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000018 X. tropicalis
JGI 4.1 e_gw1.230.50.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7722283 BC160531 X. tropicalis
NM_001123419 X. tropicalis
IMAGE:4963700 BC056048 X. laevis.S
L25600 X. laevis.S
NM_001086721 X. laevis.S
AY644403 X. laevis.L
NM_001172192 X. laevis.L
XM_018250580 X. laevis.L

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA077m14 CR428588 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7517699 CX749013 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7517699 CX749012 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGp998I108637 BX848321 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL067n04 BJ061051 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL093g07 BJ071174 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk54o09ex DC034023 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk112k12ex DC039646 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3548625 BG021517 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL067n04 BJ079255 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL093g07 BJ088558 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25