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Summary Expression Phenotypes Gene Literature (2) GO Terms (3) Nucleotides (201) Proteins (58) Interactants (89) Wiki
XB-GENEPAGE-489364

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pfdn6 - All

Models - Gene (37)
Models - mRNA (39)
mRNAs (11)
ESTs (88)

Models - Gene (37)

Source Version Model Species
NCBI 10.0 XBXT10g007623 X. tropicalis
NCBI 10.1 XBXL10_1g35408 X. laevis.L
NCBI 10.1 XBXL10_1g38253 X. laevis.S
ENSEMBL 10.0 pfdn6 X. tropicalis
JGI 9.1 Xelaev18039128m.g X. laevis.L
JGI 9.1 Xelaev18042420m.g X. laevis.S
Xenbase 9.1 gene6830 X. tropicalis
Xenbase 9.2 gene5789 X. laevis.L
Xenbase 9.2 gene40898 X. laevis.S
ENSEMBL 9.1 pfdn6 X. tropicalis
JGI 7.1 Xetro.H01024 X. tropicalis
JGI 7.2 Xelaev16058810m.g X. laevis.L
JGI 7.2 Xelaev16008411m.g X. laevis.S
JGI 6.0 XeXenL6RMv10023354m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023354m.g X. laevis.S
JGI 6.0 XeXenL6RMv10049558m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000020401 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_396000005 X. tropicalis
JGI 4.1 e_gw1.396.112.1 X. tropicalis
JGI 4.1 e_gw1.396.17.1 X. tropicalis
JGI 4.1 e_gw1.396.83.1 X. tropicalis
JGI 4.1 gw1.396.112.1 X. tropicalis
JGI 4.1 gw1.396.17.1 X. tropicalis
JGI 4.1 gw1.396.83.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960112 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3960005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3960004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_396000004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_396000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_396000004 X. tropicalis

Models - mRNA (39)

Source Version Model Species
NCBI 10.0 mRNA037739 X. tropicalis
NCBI 10.1 XBmRNA66857 X. laevis.L
NCBI 10.1 XBmRNA72269 X. laevis.S
ENSEMBL 10.0 ENSXETT00000044012 X. tropicalis
JGI 9.1 Xelaev18039128m X. laevis.L
JGI 9.1 Xelaev18042420m X. laevis.S
Xenbase 9.1 rna22051 X. tropicalis
Xenbase 9.2 rna16942 X. laevis.L
Xenbase 9.2 rna83103 X. laevis.S
ENSEMBL 9.1 ENSXETT00000044012 X. tropicalis
JGI 7.1 Xetro.H01024.2 X. tropicalis
JGI 7.1 Xetro.H01024.1 X. tropicalis
JGI 7.1 Xetro.H01024.3 X. tropicalis
JGI 7.2 Xelaev16008411m X. laevis.S
JGI 7.2 Xelaev16058810m X. laevis.L
JGI 6.0 XeXenL6RMv10023354m X. laevis.L
JGI 6.0 XeXenL6RMv10023354m X. laevis.S
JGI 6.0 XeXenL6RMv10049558m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_396000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000044012 X. tropicalis
JGI 4.1 e_gw1.396.112.1 X. tropicalis
JGI 4.1 e_gw1.396.17.1 X. tropicalis
JGI 4.1 e_gw1.396.83.1 X. tropicalis
JGI 4.1 gw1.396.112.1 X. tropicalis
JGI 4.1 gw1.396.17.1 X. tropicalis
JGI 4.1 gw1.396.83.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960112 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3960005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3960004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_396000004 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_396000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_396000004 X. tropicalis

mRNAs (11)

Clone Accession Species Library Anatomy Stage
NM_001015908 X. tropicalis
TTpA004p01 CR926429 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7632375 BC135864 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_012968348 X. tropicalis
IMAGE:8332670 BC123375 X. laevis.L
IMAGE:6866404 BC084766 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001096949 X. laevis.L
NM_001094973 X. laevis.S
XM_018232069 X. laevis.S
XM_018229275 X. laevis.L
XM_018229274 X. laevis.L

ESTs (88)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8871533 EL713430 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8866776 EL705587 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs31O16 CN089332 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs30B07 CN088705 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs28N19 CN087478 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs16J14 CN079682 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st110e02 DC194448 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7785203 CX315995 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632375 CX398158 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628102 CX382274 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7514781 CX745019 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7588564 CX310449 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA042d08 CR584557 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019a22 CR571615 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA038a13 CR569171 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014l01 CR565264 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA016m19 CR561616 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA043k02 CR434924 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA030g15 CR427833 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA010o18 CR415355 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr35A19 CN110199 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr17B06 CN100441 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10A12 CN095631 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas018a19 AL633707 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA023g17 BX713713 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA004p01 BX706080 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu125g01 AL795079 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111m06 AL792240 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107i20 AL790520 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098o22 AL790181 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049e10 AL662386 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021i09 AL645429 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
L1G3g4 AL643788 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8892667 EL852874 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8871533 EL713429 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8866776 EL705586 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs31O16 CN089331 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs30B07 CN088704 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs28N19 CN087477 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs16J14 CN079681 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst110e02 DC163796 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7785203 DR904221 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7514781 CX745018 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7628102 CX382273 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA042d08 CR584558 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019a22 CR571616 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA038a13 CR569172 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA030g15 CR427834 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA053c07 CR420171 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA010o18 CR415356 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr35A19 CN110198 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr17B06 CN100440 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10A12 CN095630 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA023g17 BX713714 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA004p01 BX706081 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu125g01 BX702200 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111m06 BX695665 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098o22 BX694845 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107i20 BX692582 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl252c16 DC109402 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl331g07 DC132470 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238o14 DC105380 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk75p09ex DC059641 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk118j11ex DC041513 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk72i23ex DC058554 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL465l10ex BP691636 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL182b13 BJ617741 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6931264 CB944169 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6866404 CA988538 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6869630 CA980935 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6866478 CA794126 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3558101 BG656839 5' X. laevis.S Wellcome CRC pRN3 St10 5 whole organism NF stage 10.5
IMAGE:3558124 BG579056 5' X. laevis.S Wellcome CRC pRN3 St10 5 whole organism NF stage 10.5
IMAGE:3301336 BE132253 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0055D01 AW637171 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl252c16 DC074807 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl238o14 DC071115 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl238b01 DC070866 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl255c16 DC075671 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl331g07 DC096505 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk72i23ex DC025133 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk75p09ex DC026203 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk118j11ex DC008626 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL465l10ex BP726065 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL217e07 BJ643498 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182b13 BJ634257 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4083963 BG023032 3' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3301336 BE491237 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage