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Summary Expression Phenotypes Gene Literature (3) GO Terms (21) Nucleotides (201) Proteins (39) Interactants (96) Wiki
XB-GENEPAGE-490390

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rab3d - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (26)
mRNAs (8)
ESTs (116)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001005621 NM_001005621.1 ras-related protein Rab-3D 1602 bp NP_001005621 X. tropicalis
NM_001094522 NM_001094522.1 RAB3D, member RAS oncogene family S homeolog 1581 bp NP_001087991 X. laevis.S
XM_018253678 XM_018253678.1 ras-related protein Rab-3D 1645 bp XP_018109167 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g17183 X. laevis.S
NCBI 10.1 XBXL10_1g14231 X. laevis.L
NCBI 10.0 XBXT10g005964 X. tropicalis
ENSEMBL 10.0 rab3d X. tropicalis
Xenbase 9.2 gene12669 X. laevis.S
Xenbase 9.2 gene6898 X. laevis.L
JGI 9.1 Xelaev18000793m.g X. laevis.S
JGI 9.1 Xelaev18019066m.g X. laevis.L
Xenbase 9.1 gene6199 X. tropicalis
ENSEMBL 9.1 rab3d X. tropicalis
JGI 7.2 Xelaev16057978m.g X. laevis.S
JGI 7.2 Xelaev16062187m.g X. laevis.L
JGI 7.1 Xetro.K00353 X. tropicalis
JGI 6.0 XeXenL6RMv10034229m.g X. laevis.S
JGI 6.0 XeXenL6RMv10045859m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027219 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000052 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_448000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000053 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_448000013 X. tropicalis
JGI 4.1 e_gw1.448.260.1 X. tropicalis
JGI 4.1 gw1.448.263.1 X. tropicalis
JGI 4.1 gw1.448.262.1 X. tropicalis
JGI 4.1 gw1.448.260.1 X. tropicalis
JGI 4.1 e_gw1.448.263.1 X. tropicalis
JGI 4.1 e_gw1.448.262.1 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA26839 X. laevis.L
NCBI 10.1 XBmRNA31848 X. laevis.S
ENSEMBL 10.0 ENSXETT00000021415 X. tropicalis
NCBI 10.0 mRNA029544 X. tropicalis
Xenbase 9.2 rna20159 X. laevis.L
Xenbase 9.2 rna36804 X. laevis.S
Xenbase 9.1 rna20036 X. tropicalis
JGI 9.1 Xelaev18019066m X. laevis.L
JGI 9.1 Xelaev18000793m X. laevis.S
ENSEMBL 9.1 ENSXETT00000021415 X. tropicalis
JGI 7.2 Xelaev16062187m X. laevis.L
JGI 7.2 Xelaev16057978m X. laevis.S
JGI 7.1 Xetro.K00353.1 X. tropicalis
JGI 6.0 XeXenL6RMv10034229m X. laevis.S
JGI 6.0 XeXenL6RMv10045859m X. laevis.L
ENSEMBL 4.1 ENSXETT00000021415 X. tropicalis
JGI 4.1 gw1.448.263.1 X. tropicalis
JGI 4.1 gw1.448.262.1 X. tropicalis
JGI 4.1 gw1.448.260.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_448000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000052 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000053 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_448000013 X. tropicalis
JGI 4.1 e_gw1.448.263.1 X. tropicalis
JGI 4.1 e_gw1.448.262.1 X. tropicalis
JGI 4.1 e_gw1.448.260.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:5308773 BC074589 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu138i16 CT025365 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001005621 X. tropicalis
IMAGE:5155766 BC082662 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094522 X. laevis.S
IMAGE:4889024 BC043857 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:7983660 BC106308 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XM_018253678 X. laevis.L

ESTs (116)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu091k21 AL778060 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu143a14 AL798340 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu138i16 AL799201 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144h09 AL799493 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st12a09 DC166193 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13a09 DC166490 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5383457 BQ395705 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6993219 CF238633 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6994797 CF239867 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
st22l11 DC169584 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6992947 CF241578 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTbA010k14 CR415318 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5336603 BQ522444 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
st28d16 DC171151 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st100k24 DC190759 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st114e13 DC193069 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr19D03 CN101603 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5308151 BQ390327 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8963904 EL655003 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:5308773 BQ391692 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xthr05J17 CN120797 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7579609 CX418321 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8921444 EL835819 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8873539 EL771883 5' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:7801097 DR833671 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7707908 CX960891 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698622 CX930798 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7628573 CX382513 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619806 CX347477 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA043o11 BX720949 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8912112 EL808532 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
THdA052p01 CR589850 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA045e06 CR449352 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054f21 CR438073 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA052a16 CR426253 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu019h24 AL637850 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu011c18 AL639785 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036h04 AL659876 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA052p01 CR589851 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8912112 EL808533 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst12a09 DC136124 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst22l11 DC139428 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst28d16 DC140990 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst100k24 DC160766 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst114e13 DC164333 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5308151 BQ390326 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308773 BQ391691 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7579609 CX418320 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu104a18 BX699346 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5383457 BQ395704 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6992947 CF241577 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5336603 BQ522443 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA010k14 CR415319 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018o01 CR418018 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054f21 CR438074 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7619806 CX347476 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628573 DR900490 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7698622 CX930797 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707908 CX960890 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8873539 EL771882 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8921444 EL835820 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr19D03 CN101602 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XL076f10 BJ063450 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6937974 CD100568 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL077n15 BJ063940 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl261f15 DC112145 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL057f04 BJ075373 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl252b14 DC109383 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7983660 DR729581 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8320625 DY553681 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319965 DY569550 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7980855 DR716459 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL016d21 BJ032295 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL031d17 BJ034895 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL044l07 BJ040188 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL003e17 BJ030154 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL034p07 BJ043474 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL011i14 BJ029163 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7981748 DR730241 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:5155766 CA792866 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8320947 DY572587 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL019o20 BJ033150 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041o02 BJ037892 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7980123 DR714853 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8538727 EB480841 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
XL473e03ex BP694008 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL436d20ex BP680920 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7979369 DR716756 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4959908 BM192618 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7983573 DR723381 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4930786 BQ731860 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL466b10ex BP691681 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL081p02 BJ065097 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl288k07 DC119945 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl261h19 DC112185 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL003e17 BJ045179 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL019o20 BJ048458 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL025o01 BJ049364 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041o02 BJ052560 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15