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Summary Expression Phenotypes Gene Literature (34) GO Terms (28) Nucleotides (127) Proteins (49) Interactants (507) Wiki
XB-GENEPAGE-490399

Show:     All X. tropicalis X. laevis

Nucleotide sequences for lhx5 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (26)
mRNAs (12)
ESTs (48)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016082 NM_001016082.2 LIM/homeobox protein Lhx5 2374 bp NP_001016082 X. tropicalis
NM_001090569 NM_001090569.1 LIM/homeobox protein Lhx5 3574 bp NP_001084038 X. laevis.S
XM_018260797 XM_018260797.2 LIM/homeobox protein Lhx5-like 3555 bp XP_018116286 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g5152 X. laevis.S
NCBI 10.1 XBXL10_1g2530 X. laevis.L
NCBI 10.0 XBXT10g017147 X. tropicalis
ENSEMBL 10.0 lhx5 X. tropicalis
Xenbase 9.2 gene39349 X. laevis.S
Xenbase 9.2 gene360 X. laevis.L
JGI 9.1 Xelaev18010382m.g X. laevis.S
JGI 9.1 Xelaev18007446m.g X. laevis.L
Xenbase 9.1 gene3663 X. tropicalis
ENSEMBL 9.1 lhx5 X. tropicalis
JGI 8.0 Xetrov14001978m.g X. tropicalis
JGI 7.2 Xelaev16054367m.g X. laevis.S
JGI 7.1 Xetro.A01005 X. tropicalis
JGI 6.0 XeXenL6RMv10006217m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000017665 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_455000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_455000002 X. tropicalis
JGI 4.1 gw1.455.41.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_455000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_455000013 X. tropicalis
JGI 4.1 gw1.455.39.1 X. tropicalis
JGI 4.1 gw1.455.3.1 X. tropicalis
JGI 4.1 e_gw1.455.41.1 X. tropicalis
JGI 4.1 e_gw1.455.39.1 X. tropicalis
JGI 4.1 e_gw1.455.3.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_455000006 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA4419 X. laevis.L
NCBI 10.1 XBmRNA9583 X. laevis.S
NCBI 10.0 mRNA084858 X. tropicalis
ENSEMBL 10.0 ENSXETT00000038344 X. tropicalis
Xenbase 9.2 rna1044 X. laevis.L
Xenbase 9.2 rna80891 X. laevis.S
ENSEMBL 9.1 ENSXETT00000038344 X. tropicalis
Xenbase 9.1 rna12030 X. tropicalis
JGI 9.1 Xelaev18010382m X. laevis.S
JGI 9.1 Xelaev18007446m X. laevis.L
JGI 8.0 Xetrov14001978m X. tropicalis
JGI 7.2 Xelaev16054367m X. laevis.S
JGI 7.1 Xetro.A01005.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006217m X. laevis.S
JGI 4.1 gw1.455.41.1 X. tropicalis
JGI 4.1 e_gw1.455.39.1 X. tropicalis
JGI 4.1 e_gw1.455.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038344 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_455000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_455000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_455000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_455000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_455000002 X. tropicalis
JGI 4.1 gw1.455.3.1 X. tropicalis
JGI 4.1 gw1.455.39.1 X. tropicalis
JGI 4.1 e_gw1.455.3.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:7552393 BC167665 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9039866 BC170608 X. tropicalis
IMAGE:9039892 BC170634 X. tropicalis
TGas054k10 CR762213 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016082 X. tropicalis
IMAGE:6865745 BC084744 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
L42546 X. laevis.S
NM_001090569 X. laevis.S
Z11587 X. laevis.S
IMAGE:6862884 BC082847 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XM_018260797 X. laevis.L
Z11588 X. laevis.L

ESTs (48)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7571686 CX513461 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas054k10 AL672547 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA019h12 CR570220 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA016j03 CR562284 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas072o11 AL775497 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098h10 AL961264 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7094129 CK662770 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
st7c18 DC175059 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7579678 CX419101 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577017 CX422794 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534674 CX429147 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570654 CX455364 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564038 CX474586 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549638 CX484910 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552393 CX494495 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr25G24 CN104158 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25G24 CN104157 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA019h12 CR570221 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7577017 CX422793 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA016j03 CR562285 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7552393 CX494494 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534674 CX429146 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549638 CX484909 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570654 CX455363 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas054k12 BX745675 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas072o11 BX752074 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst7c18 DC144731 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7571686 CX513460 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579678 CX419100 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564038 CX474585 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6871824 CB196970 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6637447 BU911462 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865745 CA793734 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6862884 CA986558 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863040 CA986629 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6862991 CB209488 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL445d23ex BP684197 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL499i24ex BP709907 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl273m23 DC115788 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl315h22 DC127649 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL016m13 BJ047503 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl315h22 DC092524 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl273m23 DC080862 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl235l17 DC070176 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL499i24ex BP741756 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445d23ex BP720162 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL179b20 BJ633517 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5278813 BQ398892 3' X. laevis.S Soares NXEG egg unfertilized egg stage